Sequence of DPV Massilia virus
Massilia virus strain W segment S, complete sequence.
ACC No: EU725773
Dated: 2010-05-13 | Length: 1864 | CRC: 375412740
ID EU725773; SV 1; linear; genomic RNA; STD; VRL; 1864 BP.
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AC EU725773; DQ656079;
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DT 05-OCT-2008 (Rel. 97, Created)
DT 13-MAY-2010 (Rel. 104, Last updated, Version 2)
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DE Massilia virus strain W segment S, complete sequence.
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KW .
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OS Massilia virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus.
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RN [1]
RP 1-1864
RX PUBMED; 19055373.
RA Charrel R.N., Moureau G., Temmam S., Izri A., Marty P., Parola P.,
RA da Rosa A.T., Tesh R.B., de Lamballerie X.;
RT "Massilia virus, a novel Phlebovirus (Bunyaviridae) isolated from sandflies
RT in the Mediterranean";
RL Vector Borne Zoonotic Dis. 9(5):519-530(2009).
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RN [2]
RP 1-1864
RA Temmam S., Charrel R.N., Izri A., Delaunay P., Toga I., Dumon H., Marty P.,
RA Parola P., De Lamballerie X.N.;
RT ;
RL Submitted (24-MAY-2006) to the EMBL/GenBank/DDBJ databases.
RL Unite des Virus Emergents, Universite de la Mediterranee, 27, boulevard
RL Jean Moulin, Marseille 13005, France
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RN [3]
RC Sequence update by submitter
RP 1-1864
RA Charrel R.N., Moureau G., Temmam S., Izri A., de Lamballerie X.;
RT ;
RL Submitted (28-APR-2008) to the EMBL/GenBank/DDBJ databases.
RL Unite des Virus Emergents (UMR190), Univ. de la Mediterranee-IRD, 27 blvd.
RL Jean Moulin, Marseille 13005, France
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CC On Oct 5, 2008 this sequence version replaced gi:110225438.
CC GenBank Accession Numbers EU725771-EU725773 represent the complete
CC genome of Massilia virus strain W.
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FH Key Location/Qualifiers
FH
FT source 1. .1864
FT /organism="Massilia virus"
FT /segment="S"
FT /host="Phlebotomus perniciosus"
FT /strain="W"
FT /mol_type="genomic RNA"
FT /country="France:Marseilles"
FT /collection_date="Jul-2005"
FT /db_xref="taxon:391640"
FT CDS 52. .1017
FT /codon_start=1
FT /product="nonstructural protein"
FT /db_xref="UniProtKB/TrEMBL:B6D3V8"
FT /protein_id="ACI24012.1"
FT /translation="MLSRVVYLRKRSSDRRKGRTQRRFFVDSFLNEAALFGPFSLAGGE
FT VPFTVYKNSVVFDSRPTLNHYLLKNEFPAILSGEMINLQSTTLYDPIMRELYHESIHQI
FT KRSNRDYLVSALRWPTGLASLEYIDFYFEDFIFLSVTDSYATNKLLKLLMKASGDQSCD
FT IEKQIKIIYRKILLEGSKFGMNCYHLTGADIIRDICIIQSARVAKLAQKTRKSPSRDVV
FT RMIYQSLSPNDLLAPSKQPSADTEASKLAAMSAEESFNFFMAENAEFRAMALSTFWTRD
FT WPTAAETLTSLRQKSKRGSGNTQLHCQFPLITHPSNYPPN"
FT CDS complement(1063. .1827)
FT /codon_start=1
FT /product="nucleocapsid"
FT /db_xref="GOA:B6A8C9"
FT /db_xref="InterPro:IPR009522"
FT /db_xref="UniProtKB/TrEMBL:B6A8C9"
FT /protein_id="ABG56148.2"
FT /translation="MSEDNYRTIALAFLDESADSTTINAWVNEFAYQGFDPKRIVQLVK
FT ERGTAKGRDWKKDVKMMIVLNLVRGNKPESMMKKMSEKGAAIVTQLISTYQLKEGNPGR
FT DTITLSRVSAAFVPWTVQALKTLSESLPVTGTTMDSIAGTTYPRCMMHPSFAGIIDLEL
FT PNNTGAMLADAHGLFMLEFSKTINPSLRTKQPNEIAATFEKPNMAAMTGRFFTRDDKKK
FT LLIAIGVLDEDLVPNPAIEKCAEKYKAKVGKV"
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SQ Sequence 1864 BP; 507 A; 456 C; 390 G; 511 T; 0 other;
eu725773 Length: 1864 13-MAY-2010 Type: N Check: 8503 ..
1 acacaaaagg actcccgtat tgcgaaatat ctactactca tcaaactagc
51 aatgctttct agagtggtat atctccgcaa gaggtctagt gacaggagga
101 agggcaggac acagagaagg ttctttgtgg actcttttct caatgaagct
151 gctctctttg ggccattcag cctggcagga ggagaggtcc ccttcacagt
201 gtataaaaac tcagtggtgt ttgactcacg acctaccctt aaccattacc
251 tgctcaagaa tgagtttcca gccatcttga gtggagaaat gataaatctc
301 cagagtacca ccctgtacga tcctatcatg agagagctgt atcatgagtc
351 aatccaccag attaagagat caaatagaga ctacctggtt agtgctctca
401 gatggcctac aggacttgct tcgttggaat acatagactt ttactttgaa
451 gatttcatat tcttatcagt gactgactca tatgctacca ataaactctt
501 gaagctttta atgaaggcct caggcgacca gtcatgtgat attgagaaac
551 agattaaaat catatacagg aagattctcc tagaagggtc aaaatttgga
601 atgaactgct atcatttaac tggtgctgac ataatacgtg acatctgtat
651 tattcagtct gcaagggttg ctaagctagc acaaaagaca cggaagagcc
701 cctctagaga tgttgtcaga atgatatatc agtctctttc ccctaatgat
751 ttgttggctc catctaagca accaagtgct gacactgagg catccaagct
801 ggctgcgatg agtgcagaag agtcatttaa tttcttcatg gctgaaaatg
851 ctgagttcag ggccatggct ttgtccacat tttggactcg cgattggccc
901 actgcagcag agactttgac aagccttagg cagaaatcaa aaagagggtc
951 aggaaacacg cagttgcact gccagtttcc cctgattacc cacccctcta
1001 attacccacc caattaagcc cttaaacccc aataatttcc cctagcccca
1051 cccccaggca gctcaaacct tcccaacctt agccttatac ttctcagcac
1101 acttctcaat ggctggattt ggcaccaggt cttcatcaag aaccccgata
1151 gcaatgagta gctttttctt gtcatctctg gtgaagaatc gtccagtcat
1201 ggcagccatg ttgggcttct caaatgttgc agcaatctca ttaggctgct
1251 tggttctaag agatgggttg atggtctttg agaattccag catgaacagc
1301 ccatgtgcgt cagccagcat agcaccagtg ttgtttggaa gttcaagatc
1351 aattatgcca gcaaagcttg gatgcatcat gcacctagga taagttgtac
1401 cagcaatgct gtccattgtt gtcccggtca caggcagaga ttctgacaag
1451 gtcttcaaag cctgaacagt ccatggcacg aaagcagcgg aaactctaga
1501 caaggtgatg gtgtctctcc caggattccc ctccttcagc tgataggtgg
1551 agatcagttg agttacaatg gcagccccct tctcagacat cttcttcatc
1601 atgctttcag gcttgttgcc tctcaccaag ttcaggacga tcatcatctt
1651 aacatccttc ttccaatctc tgccctttgc agttcctctc tccttcacca
1701 attgcacaat ccttttaggg tcaaaccctt ggtaagcaaa ctcattgacc
1751 caggcattaa tggtagttga gtctgcagac tcgtccaaaa acgctagggc
1801 gattgttctg tagttatcct cagacatttt ttaatagtca gctaatacac
1851 gggaatctct gtgt