Sequence of DPV Sweet potato feathery mottle virus
Sweet potato feathery mottle virus isolate OR2-4 polyprotein gene, partial cds.
ACC No: EU809492
Dated: 2012-09-03 | Length: 1281 | CRC: 429929147
ID EU809492; SV 1; linear; genomic RNA; STD; VRL; 1281 BP.
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AC EU809492;
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DT 30-DEC-2009 (Rel. 103, Created)
DT 03-SEP-2012 (Rel. 114, Last updated, Version 2)
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DE Sweet potato feathery mottle virus isolate OR2-4 polyprotein gene, partial
DE cds.
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KW .
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OS Sweet potato feathery mottle virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1281
RX DOI; 10.1094/PDIS-93-9-0933.
RX AGRICOLA; IND44294830.
RA Rannali M., Czekaj V., Jones R.A.C., Fletcher J.D., Davis R.I., Mu L.,
RA Valkonen J.P.T.;
RT "Molecular Characterization of Sweet potato feathery mottle virus (SPFMV)
RT Isolates from Easter Island, French Polynesia, New Zealand, and Southern
RT Africa";
RL Plant Dis. 93(9):933-939(2009).
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RN [2]
RP 1-1281
RA Rannali M., Czekaj V., Jones R., Fletcher J., Davis R., Mu L., Valkonen J.;
RT ;
RL Submitted (09-JUN-2008) to the INSDC.
RL Department of Applied Biology, University of Helsinki, PL 27
RL Latokartanonkaari 7, Helsinki 00014, Finland
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FH Key Location/Qualifiers
FH
FT source 1. .1281
FT /organism="Sweet potato feathery mottle virus"
FT /host="Ipomoea batatas (sweet potato)"
FT /strain="O"
FT /isolate="OR2-4"
FT /mol_type="genomic RNA"
FT /country="French Polynesia:Moorea"
FT /db_xref="taxon:12844"
FT CDS <1. .1101
FT /codon_start=1
FT /product="polyprotein"
FT /db_xref="GOA:D2CTK6"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="UniProtKB/TrEMBL:D2CTK6"
FT /protein_id="ACJ01836.1"
FT /translation="GKAPYIAETALKALYTGIQPSTSELSVYTRVLNEMYDDSMFQENE
FT LEVYHQSSENIGFKDAGADPPAPKPKINPPPPTITEIVDPEDPKQAALKAARAKQPATI
FT PESYGRDTSKEKESIVGTSSKGVRDKDVNVGTVGTFVVPRVKMNANKKRQPMVNGRTII
FT NFQHLSTYEPEQYEVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLMVWCIENGT
FT SPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPR
FT YGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHLQMKAAALKNARNRLFGLDGNVSTQ
FT EEDTERHTTTDVTRNIHNLLGMRGVQ"
FT mat_peptide <1. .153
FT /product="nuclear inclusion protein b"
FT /note="NIb"
FT mat_peptide 154. .1098
FT /product="coat protein"
FT /note="CP"
FT 3'UTR 1102. .1281
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SQ Sequence 1281 BP; 417 A; 240 C; 298 G; 326 T; 0 other;
eu809492 Length: 1281 03-SEP-2012 Type: N Check: 1609 ..
1 gggaaagcac catacatagc tgaaactgca ctcaaagcac tctacactgg
51 tattcaacct agtacttctg aactgagtgt gtatacaaga gtacttaacg
101 aaatgtacga tgatagtatg tttcaagaga atgagttgga agtatatcat
151 caatctagtg agaatattgg atttaaagat gctggagcgg atcctccagc
201 ccctaagccc aagatcaatc ctccaccacc tacaataact gagatcgttg
251 atccggagga cccgaagcaa gcagccttaa aagctgcacg agcaaagcaa
301 cccgcaacca ttccagaatc atatgggcgt gatacgagca aagaaaagga
351 atcaatagtg ggaacatcat caaagggtgt gagagataaa gatgttaatg
401 ttggcacagt tggtacattt gttgtaccac gtgttaagat gaatgcaaat
451 aagaagagac aaccaatggt caatggaagg accattataa atttccaaca
501 cttgtcaacg tatgaaccag agcagtatga agtcgcgaac acccgctcga
551 ctcaagagca attccaagca tggtatgagg gagttaaagg ggattacggt
601 gttgacgaca caggaatggg gatcttattg aatggactaa tggtttggtg
651 cattgaaaat ggcacatccc caaatataaa tggtgtgtgg acaatgatgg
701 acggtgatga acaagtgaca tatccaatta aaccattatt ggatcatgca
751 gtgcctactt ttaggcagat tatgacgcac ttcagtgacg ttgctgaagc
801 ctatatagaa atgcgaaacc gtacaaaggc gtacatgcca agatatggtt
851 tacaacgtaa tttgactgat atgagtcttg cgcgatatgc atttgatttt
901 tacgagctgc attcaactac acctgcacgc gctaaagaag cacatttaca
951 gatgaaggca gccgcactta agaatgcgcg aaatcggttg tttggtttgg
1001 acggaaacgt ctccacgcaa gaagaagata cggagaggca cacgacaact
1051 gatgttacta gaaatataca taacctctta ggaatgaggg gtgtgcaata
1101 ggacatcctc tgcactgtag cttatactta tgttatcttt agtatgtctt
1151 taatttaaat tcgtatcttt cagtcccgaa ggagatggtt gaatgcataa
1201 catggtggga ttgtatctcg gttattgcat ttgagaagtc acctttctat
1251 tacgtatcat aagggactct taaaagtgag g