Sequence of DPV Sweet potato virus C
Sweet potato feathery mottle virus isolate PS3A-3 polyprotein gene, partial cds.
ACC No: EU809502
Dated: 2012-09-03 | Length: 1234 | CRC: -89435225
ID EU809502; SV 1; linear; genomic RNA; STD; VRL; 1234 BP.
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AC EU809502;
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DT 30-DEC-2009 (Rel. 103, Created)
DT 03-SEP-2012 (Rel. 114, Last updated, Version 2)
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DE Sweet potato feathery mottle virus isolate PS3A-3 polyprotein gene, partial
DE cds.
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KW .
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OS Sweet potato virus C
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1234
RX DOI; 10.1094/PDIS-93-9-0933.
RX AGRICOLA; IND44294830.
RA Rannali M., Czekaj V., Jones R.A.C., Fletcher J.D., Davis R.I., Mu L.,
RA Valkonen J.P.T.;
RT "Molecular Characterization of Sweet potato feathery mottle virus (SPFMV)
RT Isolates from Easter Island, French Polynesia, New Zealand, and Southern
RT Africa";
RL Plant Dis. 93(9):933-939(2009).
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RN [2]
RP 1-1234
RA Rannali M., Czekaj V., Jones R., Fletcher J., Davis R., Mu L., Valkonen J.;
RT ;
RL Submitted (09-JUN-2008) to the INSDC.
RL Department of Applied Biology, University of Helsinki, PL 27
RL Latokartanonkaari 7, Helsinki 00014, Finland
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FH Key Location/Qualifiers
FH
FT source 1. .1234
FT /organism="Sweet potato virus C"
FT /host="Ipomoea batatas (sweet potato)"
FT /strain="C"
FT /isolate="PS3A-3"
FT /mol_type="genomic RNA"
FT /country="Chile:Easter Island"
FT /db_xref="taxon:930881"
FT CDS <1. .1069
FT /codon_start=2
FT /product="polyprotein"
FT /db_xref="GOA:D2CTL6"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="UniProtKB/TrEMBL:D2CTL6"
FT /protein_id="ACJ01846.1"
FT /translation="ALKSLYTGVQPSAGDLSEYTRVLNEMYDDSLLQDNDLTVYHQSGN
FT PSEFKDAGANPPAPKPKGPYTAPEITEITEPEDPKQAALREARQKQPAVTPESYGRDTG
FT EKPMRSVSPQRVKDKDVNVGTTGTFLVPRVKLHTSKMRQPRVNGISVVNLQHLATYEPE
FT QHNIGNTRSTQEQFQAWYEGVKGDYGVDDAGMAILLNGLMVWCIENGTSPNINGVWTMM
FT DGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMS
FT LARYAFDFYELHSTTPTRAKEAHMQMKAAALKNAHNRLFGLDGNVSTQEEDTERHPATD
FT VTRNIHNLLGMRGVH"
FT mat_peptide <1. .127
FT /product="nuclear inclusion protein b"
FT /note="NIb"
FT mat_peptide 128. .1066
FT /product="coat protein"
FT /note="CP"
FT 3'UTR 1070. .1234
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SQ Sequence 1234 BP; 382 A; 252 C; 285 G; 315 T; 0 other;
eu809502 Length: 1234 03-SEP-2012 Type: N Check: 1791 ..
1 tgcacttaaa tcactgtata ctggagtaca acctagcgct ggcgatctca
51 gcgagtacac acgtgtcctt aacgagatgt atgatgatag cctccttcaa
101 gacaatgatt taacagtgta tcatcaatct ggcaacccct ctgaatttaa
151 agatgcaggt gcgaacccac cagcaccaaa gccaaaaggg ccgtacacag
201 caccagaaat cacagaaatt actgagcccg aggatcccaa acaagctgcg
251 cttcgcgaag ctagacagaa acaacctgct gtcacacccg aatcatacgg
301 tagagataca ggtgagaaac ctatgcgctc tgtttcacca caaagggtaa
351 aagacaagga tgtcaatgtt ggtacgacag gtacattttt agtaccacga
401 gttaagcttc atactagtaa aatgcgccaa ccgagagtca atggaatctc
451 tgtagtaaac ttacaacacc ttgcaaccta cgaacctgag caacataaca
501 ttgggaatac acgctcaacc caggaacagt ttcaagcatg gtatgaaggt
551 gtcaagggtg attatggtgt tgatgacgct ggaatggcaa tcttgttgaa
601 tggattgatg gtatggtgca tagagaatgg aacatctcca aatataaatg
651 gcgtttggac gatgatggat ggggatgaac aagtgacgta tcccataaag
701 ccattactgg atcatgcagt gcctactttt aggcaaatca tgacacactt
751 cagtgacgtt gctgaagcgt acatagaaat gaggaatcgc accaaggcat
801 atatgcctag gtatggatta caacgtaatt tgactgatat gagtcttgcg
851 cgatatgcat ttgatttcta tgagctgcac tcaacaacac ctacacgtgc
901 taaagaagca cacatgcaga tgaaagcagc tgcacttaag aatgcgcata
951 atcggttgtt tggtttggat ggaaacgtct ccacgcaaga agaggacacg
1001 gagaggcacc ctgcgactga tgttactaga aatatacata accttttagg
1051 aatgaggggt gtgcactagg tgaaactttg cactgtattt atttacttat
1101 gtggttttta gtatgccttt atttaaattc gtgtttttca gtcccgacag
1151 aaaaggttgg gtgtatcgac agagtgggct ttttaatttg tccatacact
1201 tgagaagttt ctggtctatt acgtatccta aggg