Sequence of DPV Malva vein clearing virus

Malva vein clearing virus isolate 02 polyprotein gene, partial cds.

ACC No: EU884406

Dated: 2009-03-04 | Length: 912 | CRC: 834971731

                
ID   EU884406; SV 1; linear; genomic RNA; STD; VRL; 912 BP.
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AC   EU884406;
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DT   04-MAR-2009 (Rel. 100, Created)
DT   04-MAR-2009 (Rel. 100, Last updated, Version 1)
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DE   Malva vein clearing virus isolate 02 polyprotein gene, partial cds.
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KW   .
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OS   Malva vein clearing virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus; unclassified Potyvirus.
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RN   [1]
RP   1-912
RX   PUBMED; 19059441.
RA   Lunello P., Tourino A., Nunez Y., Ponz F., Sanchez F.;
RT   "Genomic heterogeneity and host recovery of isolates of Malva vein clearing
RT   virus";
RL   Virus Res. 140(1-2):91-97(2009).
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RN   [2]
RP   1-912
RA   Lunello P., Tourino A., Nunez Y., Ponz F., Sanchez F.;
RT   ;
RL   Submitted (14-JUL-2008) to the EMBL/GenBank/DDBJ databases.
RL   Centro de Biotecnologia y Genomica de Plantas (CBGP, UPM-INIA), Autopista
RL   A-6, km 7, Madrid 28040, Spain
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FH   Key             Location/Qualifiers
FH
FT   source          1. .912
FT                   /organism="Malva vein clearing virus"
FT                   /host="Malva sp."
FT                   /isolate="02"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /collection_date="04-Apr-2002"
FT                   /db_xref="taxon:565624"
FT   CDS             <1. .912
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ACJ72226.1"
FT                   /translation="AEEKLNAGVPTPSGGGRRPGKESMPPDQQTQEDSGARETPSNTER
FT                   LNVGGELTKSQGPGMMVNKPDRDINVGTTGVVSAPRLTGMVAKMRIPKFKGKHAMHMGH
FT                   LMTYNPVQTDLSNARATQRQFEQWFEGVRNEYGVTEEQMTIIANGLMVWCIENGTSPNI
FT                   NGVWTMMDGEEQVEYPLRPVMDHAAPTLRQIMAHFSDVAEAYIEKRNYHGNYMPRWGRQ
FT                   RNIRDRSLARYCFDFYEVTTSTPLRAVEAHNQMKAAALRGETNRLFGMDGKVTTQEENT
FT                   ERHTAEDVNTNLHTLLGMRGVQ"
FT   mat_peptide     <1. .909
FT                   /product="coat protein"
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SQ   Sequence 912 BP; 314 A; 175 C; 234 G; 189 T; 0 other;

eu884406 Length: 912  04-MAR-2009  Type: N  Check: 9410  ..

       1  gctgaagaga aactaaatgc cggtgttcca acaccatcag gaggtggcag
      51  gagaccagga aaagagagca tgccaccaga tcaacaaact caagaagact
     101  ctggagcgag agaaacacct tcaaacactg aaagattgaa cgttggagga
     151  gagttgacaa agtcacaagg gccaggaatg atggtaaaca aaccagatag
     201  ggatataaac gttggcacaa caggagtcgt atccgcacca cgactcactg
     251  gaatggttgc aaaaatgaga atacctaagt tcaaggggaa acatgccatg
     301  cacatggggc atctcatgac ttataatcct gttcaaacag atttgtccaa
     351  tgcgcgcgca acacagagac aatttgagca gtggtttgaa ggagtgcgga
     401  atgaatatgg tgtcactgag gaacaaatga ccatcatagc caatggattg
     451  atggtttggt gtattgaaaa tggaacatca ccaaacatta atggagtttg
     501  gactatgatg gatggtgaag agcaagttga atatccatta cgaccagtga
     551  tggatcatgc agcaccaaca ttaagacaga taatggcaca ttttagtgac
     601  gttgccgagg cgtatatcga aaagagaaat taccatggta attacatgcc
     651  acgctggggt aggcaacgaa acatcagaga ccgtagttta gcacgctatt
     701  gttttgactt ctatgaagtc acaactagta cgccactccg agcagtcgag
     751  gctcacaatc aaatgaaagc agccgcttta cgtggtgaaa caaacagatt
     801  gttcggaatg gatggaaagg tcacaacaca ggaggagaac acggagagac
     851  acacggcaga ggatgttaat actaatctgc atacacttct tggcatgaga
     901  ggtgttcagt ga