Sequence of DPV Vallota speciosa virus
Vallota speciosa virus - Narcissus/GBR/2008 polyprotein gene, partial cds.
ACC No: FJ032248
Dated: 2008-09-24 | Length: 1560 | CRC: 484619460
ID FJ032248; SV 1; linear; genomic RNA; STD; VRL; 1560 BP.
XX
AC FJ032248;
XX
DT 24-SEP-2008 (Rel. 97, Created)
DT 24-SEP-2008 (Rel. 97, Last updated, Version 1)
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DE Vallota speciosa virus - Narcissus/GBR/2008 polyprotein gene, partial cds.
XX
KW .
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OS Vallota speciosa virus - Narcissus/GBR/2008
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus; unclassified Potyvirus.
XX
RN [1]
RP 1-1560
RA Nixon T.P., Monger W.A.;
RT "Viruses of UK Narcissus";
RL Unpublished.
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RN [2]
RP 1-1560
RA Nixon T.P., Monger W.A.;
RT ;
RL Submitted (15-AUG-2008) to the EMBL/GenBank/DDBJ databases.
RL Virology, Central Science Laboratory, Sand Hutton, York YO41 1LZ, UK
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FH Key Location/Qualifiers
FH
FT source 1. .1560
FT /organism="Vallota speciosa virus - Narcissus/GBR/2008"
FT /specific_host="Narcissus sp. cv. 'Missouri'"
FT /mol_type="genomic RNA"
FT /country="United Kingdom"
FT /collection_date="2008"
FT /db_xref="taxon:560227"
FT CDS <1. .1393
FT /codon_start=2
FT /product="polyprotein"
FT /protein_id="ACH99849.1"
FT /translation="STVVDNTIMVMMAVQYALRRCQIDTETQGDLIKYFCNGDDLIIAV
FT RPDQASILDTFQESFEHLGLVYDFSSRMTDLSKLSFMSHVGKLVEQTYIPKLDIERIVA
FT ILEWDRSSEPLSRLESLVAAMIEAWGYDELIHEIRKFYAWVLEQAPYSQLAMDGKAPYL
FT AETALKRLYLDVHATEAELERYYNEYINVVMGDAPQRVAFQSDETTDAARQQLVKNKDK
FT QLADAQRDVEGGSHGTFTIPRFKGISGKLKYPKFEGDTAVNLEHLLEYNPDQLDIANNR
FT STQQQFNVWFKRVMEAYGSDLEGMKLITNGLMVWCIENGTSMNLKGSWVMMDGETQVEY
FT PLAPVLEFAQPTFRQIMMHFSDLAEAYIEKRNVTERYMPRYGLQRNLRDYGAARVAFDF
FT FTIKSSTSAKLRESCIQMKAAAVKGGNNQLFGLDAKVGSEEEDTERHTTDDVRRGMHSL
FT QGARF"
FT mat_peptide <1. .613
FT /product="Nib"
FT mat_peptide 614. .1390
FT /product="coat protein"
FT 3'UTR 1394. .1550
XX
SQ Sequence 1560 BP; 495 A; 283 C; 392 G; 390 T; 0 other;
fj032248 Length: 1560 24-SEP-2008 Type: N Check: 6555 ..
1 gtcaactgtt gttgacaaca caatcatggt aatgatggct gttcaatacg
51 cattgaggcg gtgccaaatt gatactgaaa cacaaggaga tttaattaaa
101 tatttttgta atggtgatga tttaataata gccgttcggc cagatcaggc
151 ctcaatactc gacaccttcc aggagagctt cgaacatctt ggtttagttt
201 acgatttttc aagtcgtatg acagacttaa gtaagttgag tttcatgtca
251 catgttggga agttggttga acaaacgtac ataccaaagc tcgacatcga
301 aaggattgtg gctattcttg agtgggatag aagtagtgaa ccgttgagca
351 ggttggagtc cttagtagcc gcaatgattg aagcgtgggg ctatgatgaa
401 ctaatccacg aaatcagaaa attttacgcg tgggtcttgg agcaagcgcc
451 atatagccag cttgcaatgg atggtaaagc accttatctg gctgagacag
501 cactgaaaag attgtatcta gatgtgcatg cgacggaagc agaattggaa
551 agatactaca atgagtacat caatgtcgtt atgggcgacg caccgcaaag
601 agttgcattt caatctgatg aaaccactga tgcagcaaga caacaactcg
651 ttaaaaacaa ggataaacaa cttgcggatg cacaaagaga tgtggaagga
701 ggttcgcatg gaacgttcac catcccacga tttaagggca taagcggtaa
751 actcaagtat ccaaaattcg aaggggacac agcggttaat ctcgaacatt
801 tgctagaata caaccccgac cagttggaca tagcaaataa ccggtcgact
851 caacaacagt tcaacgtgtg gtttaaacgc gtcatggaag catatggcag
901 tgatttagag gggatgaaat taatcacgaa tggattgatg gtttggtgta
951 ttgagaatgg cacatcaatg aacctgaaag gtagttgggt aatgatggac
1001 ggggaaacac aagtcgaata tccattagct ccagttttgg aattcgcaca
1051 gcctacattt aggcaaataa tgatgcactt cagtgaccta gctgaagcat
1101 atatcgagaa gagaaatgtt actgaacggt atatgccacg ttatggcctc
1151 caaaggaatc tgagagatta tggtgcagca cgagtggcct ttgacttttt
1201 cacaattaag tcaagcacat cggcaaaatt aagggagtct tgcatacaaa
1251 tgaaagcagc ggccgtcaaa ggtggtaata accaattatt tggcctggac
1301 gcgaaggtgg ggagtgaaga ggaagacaca gagagacaca caacagatga
1351 tgtgcgtaga ggaatgcact ccttacaggg tgcacgcttt taggccttta
1401 gtcttgaagt tagcatattt cctttcccag tttagagtga agtactaaat
1451 gaggagtacc tctggtatgt ataagactaa acatcgctcg cattgcccgc
1501 catgctagga gagtctttga ctcgtgtgtg gtgttcttag tgagggagac
1551 aaaaaaaaaa