Sequence of DPV Ornithogalum mosaic virus
Ornithogalum mosaic virus isolate OSS-5 polyprotein gene, partial cds.
ACC No: FJ159375
Dated: 2008-09-28 | Length: 1649 | CRC: 191435275
ID FJ159375; SV 1; linear; genomic RNA; STD; VRL; 1649 BP.
XX
AC FJ159375;
XX
DT 28-SEP-2008 (Rel. 97, Created)
DT 28-SEP-2008 (Rel. 97, Last updated, Version 1)
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DE Ornithogalum mosaic virus isolate OSS-5 polyprotein gene, partial cds.
XX
KW .
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OS Ornithogalum mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1649
RA Hammond J., Reinsel M.D., Vaira A.M.;
RT "Potyvirus Diversity in Lachenalia and Ornithogalum";
RL Unpublished.
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RN [2]
RP 1-1649
RA Hammond J., Reinsel M.D.;
RT ;
RL Submitted (25-AUG-2008) to the EMBL/GenBank/DDBJ databases.
RL Floral and Nursery Plants Research Unit, National Arboretum, US Department
RL of Agriculture, 10300 Baltimore Avenue, Building 010A, Beltsville, MD
RL 20705, USA
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FH Key Location/Qualifiers
FH
FT source 1. .1649
FT /organism="Ornithogalum mosaic virus"
FT /specific_host="Ornithogalum"
FT /isolate="OSS-5"
FT /mol_type="genomic RNA"
FT /country="USA:Maryland"
FT /collection_date="2006"
FT /db_xref="taxon:12204"
FT CDS <1. .1377
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="ACI06086.1"
FT /translation="STVVDNTLMVVLAMNYALAKLSISYDQINERIRYFANGDDLLIAV
FT EPEGGNQILDSLTASFSELGLNYDFSDRTRDKSQLSFMSHQALWVDGMYIPKIKEERVV
FT SILEWDRSTQPEHRIEAVCAAMIEAWGYPDLLQEIRKFYAYMVTQEPYSAIHAQGKTRY
FT ISEQALITLYKDRKVVLGDIEPYIQKLAEMSLEFEDEEVHHQADSMDAGGPSRQPVEVA
FT RQPDQDVNAGTFPIARVKAISDKMMLPKVRGKAVLNLQHLIQYSPEQTEISNTRATRTQ
FT FDHWYDKVKESYGVTDDQMSVILNGLMVWCIENGTSPNLSGNWTMMDGNEQIEYPLQPV
FT LENAQPTFRQIMAHFSNAAEAYIEKRNSEQRYMPRYGNQRNLNDYSLARYAFDFYEMTS
FT RTPNRAREAHIQMKAAALRNTKTKLFGLDGKVGTEEEDTERHTASDVRRDMHSLLGVSM
FT "
FT mat_peptide <1. .615
FT /product="nuclear inclusion b protein"
FT /note="NIb; replicase"
FT mat_peptide 616. .1374
FT /product="coat protein"
FT /note="CP"
XX
SQ Sequence 1649 BP; 517 A; 316 C; 392 G; 424 T; 0 other;
fj159375 Length: 1649 28-SEP-2008 Type: N Check: 4311 ..
1 tcaacagttg ttgacaatac attgatggtt gttcttgcca tgaattacgc
51 tttggcaaaa ctttcaatat catatgatca gataaacgaa cgcattcgtt
101 actttgccaa cggcgatgat ttgttaattg cagttgaacc agaaggtggc
151 aatcaaattt tggactctct cacggcatct ttttctgaat taggacttaa
201 ctacgatttt agcgatagga caagggacaa gtcacaactt agtttcatgt
251 cacatcaggc attatgggtg gacggaatgt acataccgaa aattaaggag
301 gaaagagtag tttctatttt ggagtgggat aggagcacgc aaccagagca
351 tcgaatcgaa gctgtgtgtg ccgcaatgat tgaagcatgg ggctaccctg
401 acttgctgca agagatcaga aaattctatg cgtatatggt cacccaagaa
451 ccatacagcg caatacacgc tcaagggaaa acgcgctaca tttcggaaca
501 agctttaatc acattgtaca aagaccgaaa agttgtgctt ggcgacattg
551 aaccgtatat tcagaaactc gccgaaatga gcttggaatt tgaagatgaa
601 gaagtccacc atcaagcaga ttcaatggat gcgggtggac ccagtcgaca
651 accggttgag gttgctcgac aaccagacca ggatgtgaat gcaggcacat
701 ttccgatagc aagagtaaag gctatcagtg acaaaatgat gctaccaaaa
751 gtgcgaggta aggcagtact caatctgcaa caccttattc agtacagccc
801 cgaacagaca gaaatatcca acacgcgggc aactcgcaca cagtttgatc
851 actggtacga taaggtgaag gaaagttatg gcgtcactga cgatcaaatg
901 tcagtgattc tgaatggctt gatggtttgg tgcatcgaaa atggcacatc
951 accaaacctg agtggaaact ggacaatgat ggatggcaac gaacaaatag
1001 aatatccatt acaaccagtt cttgagaatg cgcaaccaac atttcgacag
1051 attatggcgc atttttcaaa cgcagccgag gcgtatattg agaaaagaaa
1101 ctcggaacaa aggtacatgc cgaggtatgg caatcaacga aatctgaacg
1151 actacagttt agctcgctat gcatttgatt tttatgaaat gacatcccgc
1201 acccctaaca gggcgcgaga ggcacatatt caaatgaaag cagcggctct
1251 tcgaaacacc aaaacgaagt tgtttggttt ggatggaaaa gttggtaccg
1301 aggaagagga cacagaacgg cacacggcaa gcgatgttcg ccgtgatatg
1351 cattcactgc taggtgttag catgtgattt agtgaaggtg ggtttagtta
1401 catgaattta aatctactct gttagcatcc tctcctatga attatgcgta
1451 gtacttattt gtcttagtga ccagtgtagc caagcgttac gctgggtgat
1501 aagacaagtg gatattagtg tgtgatttcg aacttattat tgttgtattg
1551 taactgctgg atgaggtgac tgttttagtc tagcacgaag attacgatag
1601 gtgactcatt tagcaaatat ttataatatt tcaatagtgt gttagagac