Sequence of DPV Iris yellow spot virus

Iris yellow spot virus isolate Cip3 nucleocapsid protein mRNA, complete cds.

ACC No: FJ185142

Dated: 2008-10-14 | Length: 822 | CRC: -886428661

                
ID   FJ185142; SV 1; linear; mRNA; STD; VRL; 822 BP.
XX
AC   FJ185142;
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DT   14-OCT-2008 (Rel. 97, Created)
DT   14-OCT-2008 (Rel. 97, Last updated, Version 1)
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DE   Iris yellow spot virus isolate Cip3 nucleocapsid protein mRNA, complete
DE   cds.
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KW   .
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OS   Iris yellow spot virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-822
RA   Turina M., Vicchi V., Ciuffo M.;
RT   "Characterization of an Iris yellow spot virus isolate from onion fields in
RT   Northern Italy";
RL   Unpublished.
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RN   [2]
RP   1-822
RA   Turina M., Ciuffo M., Vicchi V.;
RT   ;
RL   Submitted (05-SEP-2008) to the EMBL/GenBank/DDBJ databases.
RL   IVV, CNR, Strada delle Cacce 73, Torino, TO 10135, Italy
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FH   Key             Location/Qualifiers
FH
FT   source          1. .822
FT                   /organism="Iris yellow spot virus"
FT                   /specific_host="Allium cepa"
FT                   /isolate="Cip3"
FT                   /mol_type="mRNA"
FT                   /country="Italy"
FT                   /collection_date="Jul-2008"
FT                   /db_xref="taxon:60456"
FT   CDS             1. .822
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /protein_id="ACI42249.1"
FT                   /translation="MSTARVKDSEIEKLLSGGDADVVIESDETEGFNFKNFVVANEGIR
FT                   MTFNNGYTILRNRAGIYKAIKSGKFTFQNKPIIIPSANVSPSQDDWTFRRLEGFIRAKM
FT                   LVELLETTNEKEKQKMYEKICGLPLVSAYGLKPSVKFDATTARIMLTLGGPLTLLASLD
FT                   SFAAAALPLAYFQNVKKEALGISRFSTYEQLCKVARVMAAKEFKFADKYKKIFDETVKI
FT                   LTKCTPGTSGAASLVKFNEQIQILEGAFGKIVEDIGESSKPKNPSKKDRYS"
XX
SQ   Sequence 822 BP; 277 A; 149 C; 178 G; 218 T; 0 other;

fj185142 Length: 822  14-OCT-2008  Type: N  Check: 8749  ..

       1  atgtctactg caagggtgaa agattcagaa attgagaaac ttctctctgg
      51  cggagatgca gatgtggtaa ttgaatctga tgaaactgaa ggattcaatt
     101  tcaagaactt tgtggtggca aatgagggta tccgaatgac attcaataat
     151  ggttacacta ttcttagaaa cagagcaggt atctacaagg caataaaatc
     201  agggaaattc acattccaaa acaaacccat tattattcct agtgctaatg
     251  tgagtcctag ccaggatgat tggacattta gaaggttaga aggctttatc
     301  agagccaaaa tgctggtaga actacttgaa acaacgaacg aaaaggaaaa
     351  acagaaaatg tatgaaaaaa tctgtgggct tcctctggtg agtgcatatg
     401  gtttgaaacc tagcgtcaag tttgatgcaa ccacagccag gatcatgcta
     451  acactaggcg gtcctctcac cttactggca agtcttgaca gctttgctgc
     501  agctgctctt ccgttagctt attttcagaa tgtgaaaaaa gaagcacttg
     551  gtataagcag attctcaact tatgagcagc tttgcaaagt tgcaagagtc
     601  atggcagcaa aagaattcaa gtttgctgac aaatacaaga agatctttga
     651  tgaaactgta aagatcctaa ctaaatgcac tcctggaact tcaggtgcag
     701  cttcattggt caagttcaat gaacagattc aaattcttga aggtgctttc
     751  ggtaagattg ttgaagacat tggtgagtct tctaaaccca agaatccctc
     801  caagaaagac agatactcat ag