Sequence of DPV Mesta yellow vein mosaic virus
Mesta yellow vein mosaic virus-[India:Bongaon:leaf curl:2007] clone LC-Bon segment DNA-A, complete sequence.
ACC No: FJ345400
Dated: 2008-11-03 | Length: 2752 | CRC: 1229392450
ID FJ345400; SV 1; circular; genomic DNA; STD; VRL; 2752 BP.
XX
AC FJ345400;
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DT 03-NOV-2008 (Rel. 97, Created)
DT 03-NOV-2008 (Rel. 97, Last updated, Version 1)
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DE Mesta yellow vein mosaic virus-[India:Bongaon:leaf curl:2007] clone LC-Bon
DE segment DNA-A, complete sequence.
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KW .
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OS Mesta yellow vein mosaic virus-[India:Bongaon:leaf curl:2007]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-2752
RA Paul S., Ghosh R., Das S., Chaudhuri S., Ghosh S.K., Roy A.;
RT "Molecular epidemiology and biodiversity of the begomovirus complex
RT associated with leaf curl disease of kenaf in India";
RL Unpublished.
XX
RN [2]
RP 1-2752
RA Paul S., Ghosh R., Das S., Chaudhuri S., Ghosh S.K., Roy A.;
RT ;
RL Submitted (26-SEP-2008) to the EMBL/GenBank/DDBJ databases.
RL Crop Protection, Central Research Institute for Jute and Allied Fibres,
RL Barrackpore, Kolkata, West Bengal 700 120, India
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FH Key Location/Qualifiers
FH
FT source 1. .2752
FT /organism="Mesta yellow vein mosaic
FT virus-[India:Bongaon:leaf curl:2007]"
FT /segment="DNA-A"
FT /host="Hibiscus cannabinus"
FT /mol_type="genomic DNA"
FT /country="India:East India, Bongaon"
FT /collection_date="2007"
FT /clone="LC-Bon"
FT /db_xref="taxon:570534"
FT gene 132. .488
FT /gene="AV2"
FT CDS 132. .488
FT /codon_start=1
FT /gene="AV2"
FT /product="AV2 protein"
FT /protein_id="ACJ03808.1"
FT /translation="MGIQLLKDSPETVHGFRCIFAINFFQQLSEEYSPDTVGYDQIRDL
FT ISILRPRIYVEASCRYRHFYPRVEGASSTELRQPLCNPCSCPHCPRHKVSYVGEQAHVS
FT EAQNVQDVQKPRCS"
FT gene complement(283. .600)
FT /gene="AC5"
FT CDS complement(283. .600)
FT /codon_start=1
FT /gene="AC5"
FT /product="AC5 protein"
FT /protein_id="ACJ03809.1"
FT /translation="MGEPNTPSNIRKTNNLTHVTNIILRIKRLHLTWAFTSLRNIWASV
FT HPVHSGLPIHGPVRPHTRLCDADSGGNCTGCIGAVEVQSTTHLRRGGRNDDIGRTLRHK
FT S"
FT gene 292. .1062
FT /gene="AV1"
FT CDS 292. .1062
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="ACJ03810.1"
FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYATRAVAPTVRVTKSRMWA
FT NRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR
FT VGKRFCVKSLYFVGKIWMDENIKTKNHTNTVMFWIVRDRRPSGTPNDFQQVFNVYDNEP
FT STATVKNDQRDRFQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH
FT TENAFVLYMACTHASNPVYATLKVRSYFYDSVTN"
FT gene complement(1028. .1468)
FT /gene="AC3"
FT CDS complement(1028. .1468)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /protein_id="ACJ03811.1"
FT /translation="MDLRTGEPITAAQAWSGAYIWEVPNPLYFKILSHEDRPYSSNMDI
FT ITVRIQFNYNLRRALGVHKCFLTFRVWTTLHPPTGLFLRVFKTQVLKYLKNLGVISINA
FT IIRAVDHVLYKKMEHTMFVDQTSEIKFDLININLLQNRRSNS"
FT gene complement(1161. .1613)
FT /gene="AC2"
FT CDS complement(1161. .1613)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /protein_id="ACJ03812.1"
FT /translation="MRSSSPLKDHCTQVPIKVQHREAKRRNRRKRVDLECGCSYYLSIN
FT CFNHGFTHRGTHHCSSSMEWRLYLGSSKSPLFQNPQPRGPALFEQHGHNNSQDPIQLQP
FT SESSGSAQVFSDLPGLDDLTPSDWSFLKGIQNPSAQVSQKSGCNLN"
FT gene complement(1510. .2598)
FT /gene="AC1"
FT CDS complement(1510. .2598)
FT /codon_start=1
FT /gene="AC1"
FT /product="replication initiator protein"
FT /protein_id="ACJ03813.1"
FT /translation="MHPKRFLINSKNYFLTYPNCSLTKEEALSQLQNLQTPTNKKFIKI
FT CRELHENGEPHIHVLIQFEGKYKCQNMRFFDLVSPNRSAHFHPNIQGAKSSSDVKAYID
FT KDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFHN
FT LNANLDRIFQEPPAPYVSPFSFSSFNQVPEELEEWASENVVDAAARPLRPRSIVIEGDS
FT RTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQ
FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWAVKNAIFVTLEGPLY
FT SGTNQSSAQGSEETQQEEESRS"
FT gene complement(2142. .2450)
FT /gene="AC4"
FT CDS complement(2142. .2450)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="ACJ03814.1"
FT /translation="MKMGNLIFTCSSSSKGSTSARICDSSTWSPQTGQHISIRTYRELN
FT QAPMSRPTSTRTGTLSSGESFRSTEDQQEEDNRQPTTLTPQHLTREVSQRLLESLRN"
XX
SQ Sequence 2752 BP; 700 A; 578 C; 631 G; 843 T; 0 other;
fj345400 Length: 2752 03-NOV-2008 Type: N Check: 1766 ..
1 accggatggc cgcgcgattt ttttgtgggc ccctccacta actcttgtct
51 gccaatcaca tgacgcgctc aaagcttaaa taatttcccg cttaattata
101 agtacttcgt cgctaagttt ctgtttgaaa aatggggatc caacttttaa
151 aggattctcc ggagacggtt cacgggtttc gttgcatctt tgctataaat
201 ttctttcaac aattgtctga ggaatactcc cctgatacgg ttgggtacga
251 tcaaattcgc gatttaattt ctatcttacg tcctaggatt tatgtcgaag
301 cgtcctgccg atatcgtcat ttctaccccc gcgtcgaagg tgcgtcgtcg
351 actgaacttc gacagcccct atgcaacccg tgcagttgcc cccactgtcc
401 gcgtcacaaa gtctcgtatg tgggcgaaca ggcccatgta tcggaagccc
451 agaatgtaca ggatgtacag aagcccagat gttcctaagg gatgtgaagg
501 cccatgtaag gtgcagtctt ttgatgcgaa gaatgatatt ggtcacatgg
551 gtaaggttat ttgtctttct gatgttacta ggggtattgg gctcacccat
601 cgagtaggga aacgtttctg cgtgaagtca ttgtattttg ttggcaaaat
651 ttggatggac gagaacatca agaccaagaa ccatacgaat actgttatgt
701 tttggattgt tagagatagg cgtccttcag gaaccccaaa cgatttccag
751 caagtgttca atgtttatga taacgagccc tctacggcta ctgtgaagaa
801 cgaccagcgt gatcgttttc aggtattgag gaggtttcaa gcaacagtca
851 caggtggtca atatgctgct aaggaacaag ctataattag gaaattctat
901 cgtgttaaca attatgtggt gtataatcac caggaagctg ggaagtacga
951 aaaccacact gagaatgcgt ttgtgttgta tatggcatgt actcatgcct
1001 ctaaccctgt gtatgctact ttgaaagtta ggagttactt ctacgattct
1051 gtaacaaatt aatattaata agatcgaatt ttatttctga agtttggtct
1101 acaaacatgg tgtgttccat tttcttatac aatacatgat caactgctct
1151 aataattgcg ttaattgaga ttacacccag atttttgaga tacttgagca
1201 cttgggtttt gaataccctt aagaaaagac cagtcggagg gtgtaaggtc
1251 gtccagaccc ggaaggtcag aaaacacttg tgcactccca gagctctccg
1301 aaggttgtag ttgaattgga tcctgactgt tattatgtcc atgttgctcg
1351 aataaggccg gtcctcgtgg ctgaggattt tgaaatagag gggatttgga
1401 acttcccaga tataggcgcc actccatgct tgagctgcag tgatgggttc
1451 ccctgtgcgt aaatccatgg ttgaagcagt taatggatag ataataagaa
1501 cacccgcatt caagatctac tctcttcctc ctgttgcgtc tcttcgcttc
1551 cctgtgctga actttgattg gtacctgagt acaatggtcc ttcaagggtg
1601 acgaagatcg cattctttac tgcccagttc tttagtgctg tgttcttttc
1651 ctcgtcgaga aattctttat aactgctgtt gggaccagga ttgcagagga
1701 agattgtcgg tattccgcct ttaatttgaa ctggcttccc gtactttgtg
1751 ttggattgcc agtccctttg ggcccccatg aactccttaa agtgcttgag
1801 gaagtgcgga tcgacgtcat caatgacgtt ataccaggcg tcgttattgt
1851 acaccttggg actcaggtcc agatgtccgc ataaatagtt atgtggtccc
1901 agagatctgg cccacatcgt cttccccgtt cgactatctc cctcaattac
1951 tatacttcga ggtctcaggg gccgcgcagc ggcatcgaca acgttttccg
2001 acgcccactc ttcaagttct tctggaactt gattgaaaga agaaaaagaa
2051 aaaggagaaa cataaggagc tggtggctcc tgaaatatcc tgtctagatt
2101 tgcatttaaa ttatgaaatt gtagtacaaa atctttagga gctagttcct
2151 taatgactct aagagcctct gacttacttc ccgcgttaag tgctgcggcg
2201 taagcgtcgt tggctgtctg ttgtcctcct cttgctgatc ttccgtcgat
2251 ctgaaactct ccccactcga gagtgtcccc gtccttgtcg atgtaggcct
2301 tgacatcgga gcttgattta gctccctgta tgttcggatg gaaatgtgct
2351 gacctgtttg gggagaccag gtcgaagaat cgcatattct ggcacttgta
2401 cttcccttcg aactggatga gcacgtgaat atgaggttcc ccattttcat
2451 ggagctctct gcagatcttg atgaattttt tatttgtagg agtttgtagg
2501 ttttgaagtt gggaaagtgc ttcttctttt gtaagagagc aatttggata
2551 agtgaggaaa taatttttgg aattaataag aaaacgtttc ggatgcatgt
2601 tgactaaatt tgatacccga ttgaccggct ttgacacttt ctcctgtata
2651 tcggtgatca atatatagtg atcaccaaat ggcaaaatgg taaaaaaaca
2701 acttttattt aaaattcgaa aaaaaaattt ttgcggccat ccgcttaata
2751 tt