Sequence of DPV Plum pox virus
Plum pox virus isolate N1 from Greece polyprotein gene, partial cds.
ACC No: FJ361237
Dated: 2008-11-03 | Length: 1565 | CRC: -429209902
ID FJ361237; SV 1; linear; genomic RNA; STD; VRL; 1565 BP.
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AC FJ361237;
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DT 03-NOV-2008 (Rel. 97, Created)
DT 03-NOV-2008 (Rel. 97, Last updated, Version 1)
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DE Plum pox virus isolate N1 from Greece polyprotein gene, partial cds.
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KW .
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OS Plum pox virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1565
RA Malinowski T.;
RT "Partial characterization of Plum pox virus isolates identified in the
RT nectarine fruit imported to Poland from Greece";
RL Unpublished.
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RN [2]
RP 1-1565
RA Malinowski T.;
RT ;
RL Submitted (06-OCT-2008) to the EMBL/GenBank/DDBJ databases.
RL Plant Physiology and Biochemistry, Res. Institute of Pomology and
RL Floriculture, Pomologiczna 18, Skierniewice 96-100, Poland
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FH Key Location/Qualifiers
FH
FT source 1. .1565
FT /organism="Plum pox virus"
FT /host="Prunus persica"
FT /strain="M (Marcus)"
FT /isolate="N1"
FT /mol_type="genomic RNA"
FT /country="Greece"
FT /db_xref="taxon:12211"
FT CDS <1. .>1565
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="ACJ04791.1"
FT /translation="DAADLGGRYDISVRSLLGSQYKRLKDAVRRKRDDVVCYTHQSMGK
FT LFCKAIGISTSFLPSTLKMFDMLIIFGLLLSIGATCNSMINEHKHLKQVAADREDKKRF
FT KRLQVLYTRLLEKIGSTPTADEFLEYVQGENPDLLKYAEDLIGDGQVVVHQSKRDSQAN
FT LERVVAFVALVMMLFDSERSDGVYKILNKLKGVMGSIDQTVHHQSLDDIEDMLDEKKLT
FT VDFVLQXXXXXXXXXXXXXXXXWWTNQLETGNVIPHYRTEGHFLEFTRENAAHIANEVM
FT HGSHQDILIRGAVGSGKSTGLPFHLSKKGHVLLIEPTRPLAENVCKQLRGQPFNVNPTL
FT RMRGMSTFGSTPITVMTSGYALHFLANNPTYLDNYKCIIFDECHVHDASAMAFRCLLSE
FT YSYPGKILKVSATPPGHEVDFKTQKEVKVIVEEALSFQQFVSNLGTGCNSDVLKHGVNV
FT LVYVASYNEVDTLSKLLTDRSFKVSKVDGRTMKVGNVEIPTSGTQAKPHFVVATNIIEN
FT GVTL"
FT mat_peptide 1. .465
FT /product="P3 protein"
FT mat_peptide 466. .621
FT /product="6K1 protein"
FT mat_peptide 622. .1565
FT /product="CI"
FT /note="cylindrical inclusion protein"
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SQ Sequence 1565 BP; 459 A; 304 C; 362 G; 386 T; 54 other;
fj361237 Length: 1565 03-NOV-2008 Type: N Check: 2849 ..
1 gacgcagcag atttaggagg caggtacgac atctccgttc ggtcattact
51 tggcagccaa tacaaacgcc tgaaagacgc agtycggcgg aaaagagacg
101 acgttgtttg ttacacacac cagtcgatgg gaaagctatt ctgcaaagct
151 atcggaattt ccacaagttt tcttccaagc actctgaaga tgtttgayat
201 gctcatcata tttggtctcc tgctttcaat aggagccaca tgcaattcaa
251 tgattaatga gcacaaacat ttaaagcaag ttgctgccga tcgtgaagat
301 aagaaaagat tcaagagatt gcaggtcttg tacacgagac tattagaaaa
351 gattggtagc acaccaacag cggatgaatt tcttgaatat gtgcaaggtg
401 agaaccctga tctattgaaa tatgcagagg acttgatcgg ygatgggcaa
451 gttgttgtgc atcaaagcaa aagagaytca caagctaatc tggarcgagt
501 cgtagcattt gtagcccttg ttatgatgct ttttgattcg gaacggagtg
551 atggtgttta caaaatcctc aataagctta agggcgtcat gggaagtatt
601 gatcagactg ttcaccatca aagtttggay gacattgaag acatgttgga
651 cgaaaagaaa ttgacagtcg atttcgtctt gcaannnnnn nnnnnnnnnn
701 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nntggtggac taatcagctt
751 gaaacaggaa atgtgatccc acactacaga actgaaggac actttctcga
801 atttacacga gaaaacgcgg cacacattgc aaacgaagtt atgcatggtt
851 cacatcaaga catcctaatc cgcggagcgg ttggctcagg taagtcaact
901 gggttgccat ttcatctaag caaaaagggt catgttttgc taattgaacc
951 cactcgacca ttagctgaaa atgtgtgcaa gcaactacga gggcaaccat
1001 tcaacgttaa tcccacgtta cgtatgcgcg gaatgagcac ttttgggtca
1051 actccaatca ctgtgatgac gagtggttac gcactgcact tcttagcgaa
1101 caatccgact tatttggata actacaagtg cattatcttc gatgagtgtc
1151 acgtacacga cgcatcagca atggcattta gatgtctcct ttcggagtat
1201 tcgtacccag ggaagatact gaaagtctca gcaacacctc ccgggcatga
1251 agttgatttc aagacacaaa aggaggtgaa ggttatcgtt gaggaagcac
1301 tgtcattcca gcagttcgtt tctaatcttg gcactggatg caatagtgat
1351 gtcttgaagc atggcgttaa cgtgctggtc tatgtggcaa gttacaatga
1401 ggtggacaca ctaagcaagc tgcttacgga tagaagcttt aaggtttcga
1451 aagttgatgg gcgaaccatg aaagtcggca atgtcgaaat tccaacgagt
1501 ggtactcaag ccaagccaca ttttgtggtt gcaacaaaca ttatcgagaa
1551 tggagtcaca ctgga