Sequence of DPV Melon yellow spot virus
Melon yellow spot virus isolate TW non-structural protein (NSs) and nucleocapsid protein (N) genes, complete cds.
ACC No: FJ386391
Dated: 2008-11-11 | Length: 3244 | CRC: 1295977335
ID FJ386391; SV 1; linear; genomic DNA; STD; VRL; 3244 BP.
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AC FJ386391; EU334833-EU334834;
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DT 11-NOV-2008 (Rel. 97, Created)
DT 11-NOV-2008 (Rel. 97, Last updated, Version 1)
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DE Melon yellow spot virus isolate TW non-structural protein (NSs) and
DE nucleocapsid protein (N) genes, complete cds.
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KW .
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OS Melon yellow spot virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN [1]
RP 1-3244
RA Chen T.-C., Lu Y.-Y., Cheng Y.-H., Chang C.-A., Yeh S.-D.;
RT "Melon yellow spot virus in watermelon: a first record from Taiwan";
RL Plant Pathol. 57:765-765(2008).
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RN [2]
RP 1-3244
RA Chen T.-C., Lu Y.-Y.;
RT ;
RL Submitted (10-DEC-2007) to the EMBL/GenBank/DDBJ databases.
RL Biotechnology, Asia University, 500 Lioufeng Rd., Wufeng, Taichung 41354,
RL Taiwan
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RN [3]
RC Sequence update by submitter
RP 1-3244
RA Chen T.-C., Yeh Y.-C., Lu Y.-Y., Yeh S.-D.;
RT ;
RL Submitted (15-OCT-2008) to the EMBL/GenBank/DDBJ databases.
RL Biotechnology, Asia University, 500 Lioufeng Rd., Wufeng, Taichung 41354,
RL Taiwan
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CC On or before Nov 10, 2008 this sequence version replaced
CC gi:164523638, gi:164523640.
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FH Key Location/Qualifiers
FH
FT source 1. .3244
FT /organism="Melon yellow spot virus"
FT /segment="S"
FT /host="watermelon"
FT /isolate="TW"
FT /mol_type="genomic DNA"
FT /country="Taiwan"
FT /collection_date="Jun-2006"
FT /note="acronym: MYSV"
FT /db_xref="taxon:89471"
FT gene 69. .1478
FT /gene="NSs"
FT CDS 69. .1478
FT /codon_start=1
FT /gene="NSs"
FT /product="non-structural protein"
FT /protein_id="ABY60852.1"
FT /translation="MANAYLTAVGYVKAYGSKDKKAVNDCYAVFNGEGTNILNLFMHSN
FT SGVKSAFSINELGRNEDMKIQEAETLTTLHDQKFFDHFGLDITFCGHVLNVIVRKHDVG
FT NIGCKFSQHNLIFCPNEETLDFTPTDKGLSLSEDEFFKATKITSEDFHPQGWCVEECKK
FT NRFTVAETSCLELNYGSPIMGKTVAYWRENISGEKLVTVKPKCINVPTALPNRLLPSST
FT VKAIQIGSELAKQATVVLSVRQSLSQDLKSQYRVTFPGVLEDLAYSRSYLVPFGAKNRI
FT IRFDSRTISDRENEQTTLILKTSTKTIESKFINRAQEHKNCIKSIGERLGLVDFVVSEP
FT NYSQIIASDFLRLQTVLSLRVSKHFKKPVIVYKLYDKETELKKVKIDGKFVSYNEDSEG
FT NVYVLNKTLDLFPKSNSSFTYLSRTMSPFWKEFPFEQHLVVDYNEFLERYLNSSSDSEE
FT EPSTSSTSSTS"
FT gene complement(2338. .3177)
FT /gene="N"
FT CDS complement(2338. .3177)
FT /codon_start=1
FT /gene="N"
FT /product="nucleocapsid protein"
FT /note="structural protein"
FT /protein_id="ABY60853.1"
FT /translation="MSTVTKLTKEKIQELLSGGKSEVEIETEESTEGFNFHSFFADVRD
FT EVKLNYNNGITILKSRKQVYAACKSGNYKFCGKKIVASGDNVGPNDWTFKRTEAVIRTL
FT MISIAEKTENEEEKQKMYEKAMQLPLVAAYGLTVPAKFDMTALRLMLCIGGPLSLLASL
FT HSLCPVVLPLAYFQNVKKEQLGIKNFSTYEQICKIARVMSASNMTFKKEFDELFKSCVK
FT ILADCKPGTTSGISLKIYNEQVQFMEQAFKSSLVVDGMGESSSKSKASSSRAKSIEV"
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SQ Sequence 3244 BP; 976 A; 591 C; 549 G; 1128 T; 0 other;
fj386391 Length: 3244 11-NOV-2008 Type: N Check: 568 ..
1 agagcaatca cggtatcaaa ttcattacaa caaacaatca gactaaaaca
51 agaaatacta tttcaggcat ggctaacgca taccttactg ctgtcggata
101 tgtcaaagca tatggttcaa aggataaaaa agctgtaaat gactgttatg
151 ctgtattcaa tggtgaaggc acaaacattt taaatctatt catgcatagc
201 aattctggag ttaagtcagc atttagcata aatgagctgg gaagaaatga
251 agatatgaag attcaggaag ctgaaacatt gactacattg catgatcaga
301 aattttttga tcattttggt cttgacatca ccttctgtgg tcatgttttg
351 aatgtcattg tgaggaaaca cgatgtcggc aacattggat gcaagttctc
401 tcagcataat ctgatcttct gtcctaatga agaaacattg gatttcactc
451 caacagacaa aggtttatct ctctctgaag atgaattctt caaagcaact
501 aaaatcacat ctgaagactt tcaccctcag ggatggtgtg ttgaagaatg
551 caaaaagaat aggttcactg ttgctgaaac atcatgttta gaactgaatt
601 atggatctcc tatcatggga aaaacagttg catattggag agagaacatt
651 tctggtgaga agttggtgac tgtaaaacca aaatgtatca atgttcctac
701 cgctcttccc aacagattgt tgccttcgtc tactgtgaaa gcaatacaaa
751 ttggatcaga acttgcaaag caagctacag tagttctatc tgtgcgtcag
801 tctttgagcc aggatctgaa gtcacaatac agggtgactt tccctggtgt
851 tcttgaagat ctagcttatt caagatctta cctggtccct tttggagcaa
901 agaacagaat aataagattt gattctagaa caataagtga tagagaaaat
951 gagcagacca ccttgatctt aaaaacttcc actaagacaa tcgaatcaaa
1001 attcatcaac agggctcaag agcacaaaaa ttgcattaaa agtattggtg
1051 aaaggcttgg acttgttgat ttcgttgtga gcgagcctaa ttacagccag
1101 atcattgctt ctgatttctt gagacttcag actgtcctct cacttagagt
1151 gtcaaagcat ttcaaaaaac ctgtgattgt gtacaagctg tatgataaag
1201 aaacagaact gaagaaggtt aaaatagacg gaaagtttgt atcatacaat
1251 gaagattctg aaggaaatgt ttatgtgcta aacaaaactt tggatttgtt
1301 tccaaagtct aactcttctt tcacgtacct cagcaggact atgtcaccat
1351 tctggaaaga gttccctttt gaacagcatc ttgtagttga ttataatgaa
1401 tttcttgaaa gatatctaaa ctcctcttct gacagcgaag aggaaccatc
1451 aactagtagt acatcatcta caagttaagc atttgtttgc tctgtaaaga
1501 gatggaagag gagaaggaga aggaaagagc tccaaggaga aggaaacagg
1551 ttaagttaat tttaagagtc ttgtttgtat atgatcataa acagacaatt
1601 atgtttatat ttaagcaaaa aagcaaaaaa aacaaaaaaa gcaaaaaagt
1651 aaaagcaaaa aaagtaaaaa taaacaaaaa caaaaaaagc atgaaggagc
1701 aagagaaggt gtaatgaata attaatgtct agtaaattag cagattaatc
1751 taaataaaag tcctctagga ggcaaataat gacctagata ctctggatca
1801 gattggccaa catcaccctt tcgggtttta ttgtaattat acataaatac
1851 acacacacta atacatccat tgcagtttgt tttcgttttc agtttttttc
1901 tttttttgtt ttttgttttt atatattttt actttttttg gttttttgat
1951 tttatcattt ttttgttcgt tttctgtttt ttgttttttg ttttgttttt
2001 tgtttttgtt ttttgctttt tttgcttttt tgcttttttt gctttttttg
2051 tctttttcat ttactttact cataattaaa attcatgttc ttgttttctc
2101 ctctctctct ttctctctct tttttctctc tcttcttcct ctttttctct
2151 ctttttttct ctctatctcc ctcttttgct ttctttctct ctcttccttt
2201 cttttctatt ttctctcttt tctctctctt tttatttcat tcaactagtt
2251 aaatattttt agattttggt ctaattctat gaagtgttct ttttccttgt
2301 tttgcattct gttgtttgat ggaactgaat gctctattta aacttcaatg
2351 gacttagctc tggaagaaga agctttactc ttagaagagc tctcacccat
2401 tccatcaact acaagagagg atttgaaagc ttgttccatg aattgcacct
2451 gttcattata aatcttcagg gatatgccac tggttgttcc tggtttgcag
2501 tcagccaaga ttttcacaca acttttgaaa agttcatcaa attctttctt
2551 gaaggtcata ttgctagcag acataacgcg agcaattttg catatctgct
2601 catatgtaga gaaattcttt attcctaatt gctctttctt gacattctga
2651 aaataggcca aaggcaggac aacagggcag agcgaatgca gactagcaag
2701 caaagataga ggtcctccaa tgcatagcat taatctcaaa gctgtcatgt
2751 caaactttgc aggcacagtt aaaccatatg cagcaaccaa tggaagctgc
2801 atggctttct catacatttt ctgcttttct tcctcattct ctgtcttttc
2851 tgcaatgctg atcatcaaag ttctgataac agcttcagtt cttttaaatg
2901 tccaatcatt aggaccaaca ttatccccag atgcaactat ctttttcccg
2951 caaaacttgt agttgccaga tttgcaagct gcataaactt gctttctgct
3001 tttcagaata gttataccat tattataatt taatttcacc tcatctctca
3051 catccgcaaa gaatgaatgg aagttaaatc cttcagttga ttcctctgtt
3101 tctatttcaa cttccgactt cccaccacta agaagttctt ggattttctc
3151 ctttgtcagc ttagtaacgg tagacatggt gtttacttag gaaacgtgta
3201 ctttgacttg ctgatgttga attttttgat acctcgattg ctct