Sequence of DPV Potato virus Y

Potato virus Y isolate Caohai polyprotein gene, partial cds.

ACC No: FJ423031

Dated: 2008-12-16 | Length: 835 | CRC: -373185795

                
ID   FJ423031; SV 1; linear; genomic RNA; STD; VRL; 835 BP.
XX
AC   FJ423031;
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DT   16-DEC-2008 (Rel. 98, Created)
DT   16-DEC-2008 (Rel. 98, Last updated, Version 1)
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DE   Potato virus Y isolate Caohai polyprotein gene, partial cds.
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KW   .
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OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-835
RA   Chen S.H., Liu X.L., Hou Z.P., He H.Y., Wu X.Q.;
RT   "The molecular variation of potato virus Y of China";
RL   Unpublished.
XX
RN   [2]
RP   1-835
RA   Chen S.H., Liu X.L., Hou Z.P., He H.Y., Wu X.Q.;
RT   ;
RL   Submitted (28-OCT-2008) to the EMBL/GenBank/DDBJ databases.
RL   College of Bioengineering, Henan University of Technology, Lianhua Street,
RL   Zhenzhou, Henan 450001, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .835
FT                   /organism="Potato virus Y"
FT                   /host="potato"
FT                   /isolate="Caohai"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="18-May-2008"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .817
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /note="encodes NIb replicase and coat protein"
FT                   /protein_id="ACJ45786.1"
FT                   /translation="TIWQANDTIDAGGSSKKDARPEQGSIQSNPNKGKDKDVNAGTSGT
FT                   HTVPRIKAITSKMRMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVRMA
FT                   YDIGETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGDEQVEYPLKPIVENAKPTLRQI
FT                   MAHFSDVAEAYIEMRNKKEPYMPRYGLIRNLRDVGLARYAFDFYEVTSRTPVRAREAHI
FT                   QMKAAALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
XX
SQ   Sequence 835 BP; 275 A; 171 C; 213 G; 176 T; 0 other;

fj423031 Length: 835  16-DEC-2008  Type: N  Check: 4561  ..

       1  caccatatgg caagcaaatg acacaatcga tgcaggagga agcagcaaga
      51  aagatgcaag accagagcaa ggcagcatcc agtcaaaccc gaacaaagga
     101  aaagataagg atgtgaatgc tggtacatct gggacacata ctgtgccgag
     151  aatcaaggct atcacgtcca aaatgagaat gcccaaaagc aagggagcaa
     201  ccgtgctaaa cttagaacac ttgcttgagt atgctccaca acaaattgat
     251  atttcaaata ctcgggcaac tcaatcacag tttgatacgt ggtatgaggc
     301  agtgcggatg gcatacgaca taggagaaac tgagatgcca actgtgatga
     351  atgggcttat ggtttggtgc attgaaaatg gaacctcgcc aaatgtcaac
     401  ggagtctggg ttatgatgga tggggatgaa caagtcgagt acccgttgaa
     451  accaatcgtt gagaatgcaa aaccaaccct taggcaaatc atggcacatt
     501  tctcagatgt tgcagaagcg tatatagaaa tgcgcaacaa aaaggaacca
     551  tatatgccac gatatggttt aattcgaaat ctgcgggatg tgggtttagc
     601  gcgttatgcc tttgactttt atgaggtcac atcacgaaca ccagtgaggg
     651  ctagggaagc gcacattcaa atgaaggccg cagcattgaa atcagcccaa
     701  cctcgacttt tcgggttgga cggtggcatc agtacacaag aggagaacac
     751  agagaggcac accaccgagg atgtctctcc aagtatgcat actctacttg
     801  gagtcaagaa catgtgatgt agtgtctcta gatgg