Sequence of DPV Raphanus sativus cryptic virus 3
Raphanus sativus cryptic virus 3 segment 1, complete sequence.
ACC No: FJ461349
Dated: 2008-12-29 | Length: 1609 | CRC: -1250351598
ID FJ461349; SV 1; linear; genomic RNA; STD; VRL; 1609 BP.
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AC FJ461349;
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DT 29-DEC-2008 (Rel. 98, Created)
DT 29-DEC-2008 (Rel. 98, Last updated, Version 1)
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DE Raphanus sativus cryptic virus 3 segment 1, complete sequence.
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KW .
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OS Raphanus sativus cryptic virus 3
OC Viruses; dsRNA viruses; Partitiviridae; unclassified Partitiviridae.
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RN [1]
RP 1-1609
RA Tian Q., Li L., Chen J.;
RT "Complete nucleotide sequences of two double-stranded RNA segments
RT extracted from the Raphanus sativus root cv. Yidianhong";
RL Unpublished.
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RN [2]
RP 1-1609
RA Tian Q., Li L., Chen J.;
RT ;
RL Submitted (13-NOV-2008) to the EMBL/GenBank/DDBJ databases.
RL Life Science Department, Institute of Bioengineering, Zhejiang Sci-Tech
RL University, Xiasha, No 2 Road, Hangzhou, Zhejiang 310018, China
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FH Key Location/Qualifiers
FH
FT source 1. .1609
FT /organism="Raphanus sativus cryptic virus 3"
FT /segment="1"
FT /host="Raphanus sativus cv. Yidianhong"
FT /isolate="RasR7"
FT /mol_type="genomic RNA"
FT /country="China"
FT /isolation_source="leaves"
FT /collection_date="Mar-2008"
FT /db_xref="taxon:580254"
FT CDS 101. .1546
FT /codon_start=1
FT /product="putative RNA-dependent RNA polymerase"
FT /protein_id="ACJ76981.1"
FT /translation="MRRLRNPLAGYVYTGFISDLEETNQRHTNVIRRETAVTYRDEFAL
FT QSILDLDYRQYEQHLQGWSRSYYTPEKHQEAILQYSYPDIPVQAIKMDVYNDCIAQVQN
FT EFRSLPNVRAYSVLTQLDLVKYKSSSAAGYGYQGTKGNPGELNHARAISRAKAVLWSAI
FT AADGEGIEHVIKTSTPDIGYTRTQLTDLTEKTKVRQVWGRAFHYILLEGLVADPFIQAV
FT MENNTFIHAGRDPTLSVPQLLSHIAETSDWIYSLDWKQFDATVSRFEIESAFTIIKSKT
FT IFPDRETEDAFEITKQLFIHKKVAAPDGKIYFAHKGIPSGSYYTSLVGSIVNRLRIEYL
FT YRLILGRGPKICHTLGDDSLVGDDELIVPSSFGLIANRIGWYFNIEKTEYSRIPEMVSF
FT LGRSYKGGLNVRDLKRCLRLLVFPEYPVPSGRISAYRAKSIAEDCGGISDLLNRVAARL
FT KRQYGLASEEEVPIYFKRYLPFM"
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SQ Sequence 1609 BP; 510 A; 343 C; 336 G; 420 T; 0 other;
fj461349 Length: 1609 29-DEC-2008 Type: N Check: 7410 ..
1 agaattttcc ccgaaacaca taatcgcgga accaagactt agcagttaag
51 gtcgcaagat ttcggtcgtg aaaatcattt cattacagcc agtcttcatc
101 atgagaagat tgcgcaaccc tttagctggt tacgtttaca caggattcat
151 ctcggatctt gaagagacaa atcagcgaca cacaaacgtt attcgacggg
201 aaaccgccgt aacgtacagg gatgagtttg cattgcaatc catcctagat
251 ctggactaca ggcagtacga gcaacatcta caaggttggt cgcgtagtta
301 ttacacccct gagaagcatc aggaagcaat tttacaatac tcctatccag
351 acataccagt tcaagccatt aaaatggacg tatacaacga ttgtatcgcc
401 caggttcaga acgaatttcg tagccttcca aacgtgaggg cctatagcgt
451 attaacccaa ttagatttgg ttaaatacaa gtcatcatcg gcggccggtt
501 acggatacca aggtactaaa ggaaatccag gtgagttaaa tcacgccagg
551 gctatttccc gagccaaagc ggttttatgg tcagccatcg cagcagacgg
601 tgaaggcatc gaacatgtca tcaagacctc aacgccagac ataggctata
651 cacgtaccca gcttacagat ctcacagaga agacgaaagt cagacaagta
701 tggggtagag cttttcatta catcctgtta gaaggattgg tcgcagaccc
751 attcattcaa gcagtaatgg agaacaatac attcatccat gctggacgag
801 atccaacact aagcgtgcca cagttattat cgcacatcgc ggaaacaagt
851 gactggatat attcattaga ttggaaacaa tttgatgcaa cagttagcag
901 attcgaaatt gagtcagctt ttactattat caagtccaag acgatcttcc
951 cagacagaga aacggaagat gcttttgaga taaccaaaca gttattcatt
1001 cataagaaag tcgccgctcc agacggtaaa atttacttcg cgcacaaagg
1051 aattccatca ggaagttatt acacttcgct agtcggatct attgttaata
1101 gactcaggat tgagtatcta tacagactaa ttttaggacg aggtcccaag
1151 atatgtcata cattaggaga cgattcacta gtaggtgatg acgagttgat
1201 agtcccatcc tcattcggcc ttatcgccaa tcgtatcggg tggtacttca
1251 atattgaaaa gacggagtac tcgagaatac cagagatggt ttcatttcta
1301 ggtcgatcct acaaaggagg tctcaacgta cgagatctta aacgatgttt
1351 aagattacta gtctttcctg aataccctgt cccatcagga agaatttcag
1401 catacagagc taaatcgata gcagaagatt gcggaggcat cagcgatcta
1451 ctaaatcgag tagcagcaag attaaagcgt cagtacggac tcgcttctga
1501 agaagaagtt ccaatctatt ttaagcgtta tttacctttt atgtaattta
1551 catttaagtt atttaaagtt ttattaataa gacgtggagg ttacatttat
1601 tttccctcc