Sequence of DPV Hop mosaic virus

Hop mosaic virus isolate AUS-BP-2 triple gene block protein 3, coat protein, and nucleic acid binding protein genes, complete cds.

ACC No: FJ463794

Dated: 2010-10-15 | Length: 1455 | CRC: -180972088

                
ID   FJ463794; SV 1; linear; genomic RNA; STD; VRL; 1455 BP.
XX
AC   FJ463794;
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DT   29-JUL-2010 (Rel. 105, Created)
DT   15-OCT-2010 (Rel. 106, Last updated, Version 3)
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DE   Hop mosaic virus isolate AUS-BP-2 triple gene block protein 3, coat
DE   protein, and nucleic acid binding protein genes, complete cds.
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KW   .
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OS   Hop mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Betaflexiviridae; Carlavirus.
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RN   [1]
RP   1-1455
RX   PUBMED; 20680359.
RA   Poke F.S., Crowle D.R., Whittock S.P., Wilson C.R.;
RT   "Molecular variation of hop mosaic virus isolates";
RL   Arch. Virol. 155(10):1721-1724(2010).
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RN   [2]
RP   1-1455
RA   Poke F.S.;
RT   ;
RL   Submitted (13-NOV-2008) to the EMBL/GenBank/DDBJ databases.
RL   Tasmanian Institute of Agricultural Research, University of Tasmania, 13 St
RL   Johns Ave, New Town, Tasmania 7008, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1455
FT                   /organism="Hop mosaic virus"
FT                   /host="hop cultivar Victoria"
FT                   /isolate="AUS-BP-2"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /db_xref="taxon:142843"
FT   CDS             1. .207
FT                   /codon_start=1
FT                   /product="triple gene block protein 3"
FT                   /protein_id="ACS45231.1"
FT                   /translation="MSLNLVCACVGLVCFACILVYLSGGGNSCIVVLTGESVRFQGCEV
FT                   TEEFARALSNVKSLGGCGTLGLE"
FT   CDS             224. .1147
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ACS45232.1"
FT                   /translation="MSGSTEAGKLAPEAQKPKHGGEETKLKEKVGAGESSTVSVDDYAA
FT                   GLKDLEAVREEMLEARLEKLREFMRRRRSAVQITNSGLETGRPALTLTADMRSDPANPY
FT                   CKPSLDSLLRIPPKPVSNNMATAEDIMKIYTNLEGLGVPTEHIQRVIIQAVIYCKDASS
FT                   SVYLDPRGSFEWPGGAIAADSVLAIMKKDAETLRRVCRLYAPVTWSYMLVHNQPPSDWA
FT                   AMGFQFEDRFAAFDCFDYVENAAAVQPLEGIVRRPTPREKLAHNTHKDMALRKANRNQL
FT                   FGNMDVEVTGGRSGPEIIRDYSKSSR"
FT   CDS             1147. .1455
FT                   /codon_start=1
FT                   /product="nucleic acid binding protein"
FT                   /protein_id="ACS45233.1"
FT                   /translation="MMHWWRAAMLLYKVMFDVCGRSSLYICVDIARRAGRPIGGGKSSY
FT                   ARKRRAIKMGRCVRCYRVSPPFYHTTRCDGLSCVPGLSLNAGVARLIKGGVTEVIPS"
XX
SQ   Sequence 1455 BP; 351 A; 313 C; 428 G; 363 T; 0 other;

fj463794 Length: 1455  15-OCT-2010  Type: N  Check: 6265  ..

       1  atgtcattaa acctggtctg cgcctgtgtc gggttagttt gcttcgcttg
      51  cattttagtg tacctgagtg gtggaggcaa tagctgtata gttgttctaa
     101  cgggggaatc agttaggttc caaggttgcg aggtcacaga agagttcgca
     151  cgtgccttat caaacgtcaa gtcccttggg ggttgtggta ctttaggttt
     201  agagtgaata attgatcaaa ataatgtctg ggagtactga agcaggaaag
     251  cttgcccctg aggcccagaa accgaagcat ggtggggaag agaccaagct
     301  caaagagaaa gtgggggctg gcgagtcctc aaccgtgagt gtagatgatt
     351  acgctgccgg gctcaaagat ctggaggcgg tccgggagga aatgctagaa
     401  gcgagattgg agaagctgag ggaatttatg cgcaggcggc gcagtgctgt
     451  tcaaatcacg aattctggct tggaaactgg taggccggcg ttgacactta
     501  ctgctgatat gcgctctgac ccagccaacc cttactgtaa accatctctt
     551  gactcactgc tgcgtatacc gccgaaacct gtttccaata acatggccac
     601  cgcagaggac ataatgaaaa tctatacaaa cttggagggg ctaggggttc
     651  cgactgagca catacaaagg gtaatcattc aggcagtgat atattgtaag
     701  gatgcgagca gctctgtata tctagatcca aggggctctt ttgagtggcc
     751  tggcggggcc attgcagctg actcagtact ggctattatg aagaaggacg
     801  cagaaacact tcggagggtc tgccgattgt atgcacccgt gacgtggtct
     851  tacatgttgg tgcacaacca gccaccctct gactgggcgg ccatggggtt
     901  tcagttcgag gatcgctttg ctgccttcga ctgcttcgat tatgttgaga
     951  atgcagctgc tgtacaaccg cttgaaggca ttgtaaggcg accaactcca
    1001  agggagaagt tggcgcacaa cacacacaaa gatatggccc ttcgaaaagc
    1051  caataggaat cagctctttg ggaatatgga cgtggaggtc accggcggcc
    1101  gcagtggccc agagattatc cgtgattatt ccaagtcgag taggtaatga
    1151  tgcactggtg gcgtgctgcc atgttattat ataaagttat gtttgatgtg
    1201  tgcggtaggt ctagtcttta catttgcgtt gatatagctc ggagggcggg
    1251  ccgtcctatt gggggcggta agtcgtccta cgctcgtaag agacgcgcaa
    1301  taaagatggg gcgatgtgtg cggtgctacc gcgtctcacc gcctttctat
    1351  catactacta gatgtgacgg tttgtcgtgt gtacctggac tctcgctaaa
    1401  tgctggcgtc gccaggttaa tcaagggtgg agtaactgag gtgatcccat
    1451  cctag