Sequence of DPV Soybean yellow mottle mosaic virus

Soybean yellow mottle mosaic virus strain HB12 coat protein (CP) gene, complete cds.

ACC No: FJ494850

Dated: 2008-12-24 | Length: 1065 | CRC: -640548923

                
ID   FJ494850; SV 1; linear; genomic RNA; STD; VRL; 1065 BP.
XX
AC   FJ494850;
XX
DT   24-DEC-2008 (Rel. 98, Created)
DT   24-DEC-2008 (Rel. 98, Last updated, Version 1)
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DE   Soybean yellow mottle mosaic virus strain HB12 coat protein (CP) gene,
DE   complete cds.
XX
KW   .
XX
OS   Soybean yellow mottle mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC   Carmovirus.
XX
RN   [1]
RP   1-1065
RA   Park S.J., Kim S.M., Nam M., Lee T.S., Kim Y.J., Moon J.K., Kim C.S.,
RA   Choi H.S., Moon J.S., Kim H.G., Lee S.H.;
RT   ;
RL   Submitted (20-NOV-2008) to the EMBL/GenBank/DDBJ databases.
RL   Agricultural Microbiology Division, National Academy of Agricultural
RL   Science, RDA, Suin-ro, 150, Suwon, Gyeongi-do 441-707, Korea
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1065
FT                   /organism="Soybean yellow mottle mosaic virus"
FT                   /host="Glycine max"
FT                   /strain="HB12"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="13-Sep-2006"
FT                   /db_xref="taxon:578361"
FT   gene            1. .1065
FT                   /gene="CP"
FT   CDS             1. .1065
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="ACK77388.1"
FT                   /translation="MNGKMLTIAQLAKKEKTEGRRALSKNQRKRLDSADTRPLKEVSST
FT                   ARVSTRRVPAAISSNVSNGVPNYAVRQNKPVIQHTELWGTLMSNSTESPAYIARTLNPS
FT                   DPATFNWVQPLSTGYDMYRLINCEIIYTPRCATTTTGSVVLAHDPDASDANPDNVTDLL
FT                   NMAGAVSGSVFSPLRIKPNIKQLDRYVRDNSTSDPKLVDAGKILVAAYGQQASTTPFAL
FT                   GEVRFSYTLQLLNPQPHSTMVQRLGAAPPPGVGPTYATLRTVNGATTSSNVLTFSTAGA
FT                   YLIPAVDATAGLGTPVTTDFGRFRVQGTSAADSPLLMFGTALKSGATITFSGPISNVLD
FT                   VYVVRDSGVSDNSS"
XX
SQ   Sequence 1065 BP; 258 A; 316 C; 247 G; 244 T; 0 other;

fj494850 Length: 1065  24-DEC-2008  Type: N  Check: 4263  ..

       1  atgaatggaa aaatgctcac cattgcccaa ctcgccaaga aggagaaaac
      51  agagggacga agggctctct ccaagaacca gcgaaagcga ctcgactccg
     101  ctgacactcg acccctcaag gaagtcagca gcaccgctag agtgtcaaca
     151  cgaagagtcc ccgctgccat ctcgtccaat gtgtccaatg gagtaccgaa
     201  ctacgctgtt cgacaaaaca aaccggtcat tcagcatact gagctatggg
     251  gaactcttat gtctaatagc actgagtccc ctgcttatat cgctcggaca
     301  ctcaacccaa gtgatcctgc aacattcaat tgggtgcaac cgctctccac
     351  agggtatgat atgtacagac tcattaattg tgagatcatc tacactccca
     401  ggtgtgcgac taccactacg ggatcggttg tcttggcgca tgatccagac
     451  gctagtgatg ctaaccctga taatgtcact gacctgctta acatggctgg
     501  cgctgtctct ggctcggtct tctctcccct caggatcaag ccaaacatta
     551  aacagctcga ccgttatgtt cgtgacaatt ctactagcga ccccaagctg
     601  gttgatgctg gcaagatatt ggttgcagca tatggacagc aagcttcaac
     651  aacccccttc gccctcggcg aagtgaggtt ttcatacacg ctccagctgc
     701  tcaaccctca gccacattca actatggtgc aacgactcgg ggctgcccca
     751  ccccctgggg tgggccccac ttacgcaacc ttgcggacag ttaatggtgc
     801  caccacatcc agcaatgttc tcacattttc gactgctggc gcctatctta
     851  ttcctgccgt tgacgcaaca gctgggctcg gaaccccggt caccactgat
     901  ttcggccggt tccgcgtaca gggcactagt gctgcggact ccccactact
     951  gatgttcgga acagccctca agagtggggc taccattacc ttcagtgggc
    1001  ctatctccaa cgttttggat gtttatgttg tgcgcgatag cggagttagc
    1051  gacaactcta gctaa