Sequence of DPV Soybean yellow mottle mosaic virus

Soybean yellow mottle mosaic virus strain HB16 coat protein (CP) gene, complete cds.

ACC No: FJ494854

Dated: 2008-12-24 | Length: 1065 | CRC: -2012331305

                
ID   FJ494854; SV 1; linear; genomic RNA; STD; VRL; 1065 BP.
XX
AC   FJ494854;
XX
DT   24-DEC-2008 (Rel. 98, Created)
DT   24-DEC-2008 (Rel. 98, Last updated, Version 1)
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DE   Soybean yellow mottle mosaic virus strain HB16 coat protein (CP) gene,
DE   complete cds.
XX
KW   .
XX
OS   Soybean yellow mottle mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC   Carmovirus.
XX
RN   [1]
RP   1-1065
RA   Lee T.S., Kim S.M., Nam M., Park S.J., Kim Y.J., Moon J.K., Kim C.S.,
RA   Choi H.S., Moon J.S., Kim H.G., Lee S.H.;
RT   ;
RL   Submitted (20-NOV-2008) to the EMBL/GenBank/DDBJ databases.
RL   Agricultural Microbiology Division, National Academy of Agricultural
RL   Science, RDA, Suin-ro, 150, Suwon, Gyeongi-do 441-707, Korea
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1065
FT                   /organism="Soybean yellow mottle mosaic virus"
FT                   /host="Glycine max"
FT                   /strain="HB16"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="13-Sep-2006"
FT                   /db_xref="taxon:578361"
FT   gene            1. .1065
FT                   /gene="CP"
FT   CDS             1. .1065
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="ACK77392.1"
FT                   /translation="MNGKIPPIAQLAKKEKTEGRRALSKNQRKRLDSADTRPLKEVSRT
FT                   ARVSTRRVPAAISSNVSNGVPNYAVRQNKPVIQHTELWGTLMSNSTESPAYIARTLNPS
FT                   DPATFNWVQPLSTGYDMYRLINCEIIYTPRCATTTTGSVVLAHDPDASDANPDNVTDLL
FT                   NMAGAVSGSVFSPLRIKPNIKQLDRYVRDNSTSDPKLVDAGKILVAAYGQQASTTPFAL
FT                   GEVRFSYTNQLLNPQPHSTMVQRLGAAPPPGVGPTYATLRTFNGPPTSSNVLTFSTAGA
FT                   YLIPAVDATAGLGTPVTTDFGRFREQGTSAADSPLLMFGTALKSGATITFSGPVSNVLD
FT                   VYVVRDSGVSDNSS"
XX
SQ   Sequence 1065 BP; 259 A; 325 C; 244 G; 237 T; 0 other;

fj494854 Length: 1065  24-DEC-2008  Type: N  Check: 267  ..

       1  atgaatggaa aaatcccccc cattgcccaa ctcgccaaga aggagaaaac
      51  agagggacga agagctctct ccaagaacca gcgaaaacga ctcgactccg
     101  ctgacactcg acccctcaag gaagtcagca gaaccgctag agtgtcaaca
     151  cgaagagtcc ccgctgccat ctcgtccaat gtgtccaatg gagtaccgaa
     201  ctacgctgtt cgacaaaaca aaccggtcat tcagcatact gagctatggg
     251  gaactcttat gtctaatagc actgagtccc ctgcttatat cgctcggaca
     301  ctcaacccaa gtgatcctgc aacattcaat tgggtgcaac cgctctccac
     351  agggtatgat atgtacagac tcattaattg tgagatcatc tacactccca
     401  ggtgtgcgac taccactacg ggatcggttg tcttggcgca tgatccagac
     451  gctagtgatg ctaaccctga taatgtcact gacctgctta acatggctgg
     501  cgctgtctct ggctcggtct tctctcccct caggatcaag ccaaacatta
     551  aacagctcga ccgttatgtt cgtgacaatt ctactagcga ccccaagctg
     601  gttgatgctg gcaagatatt ggttgcagca tatggacagc aagcttcaac
     651  aacccccttc gccctcggcg aagtgaggtt ttcatacacg aaccagctgc
     701  tcaaccctca gccacattca actatggtgc aacgactcgg ggctgccccc
     751  ccccctgggg tgggccccac ctacgcaacc ttgcgtacat tcaatggccc
     801  ccccacatcc agcaatgttc tcacattttc gactgctggc gcctacctca
     851  ttcccgccgt tgacgcaaca gctgggctcg gaaccccggt gaccactgat
     901  ttcggccggt tccgcgaaca gggcactagt gctgcggact ccccactact
     951  gatgttcgga acagccctca agagtggggc taccattacc ttcagtgggc
    1001  ctgtctccaa cgttttggat gtttatgttg tgcgcgatag cggagttagc
    1051  gacaactcta gctag