Sequence of DPV Arisaema potyvirus 2

Arisaema potyvirus 2 isolate AR-12 polyprotein gene, partial cds.

ACC No: FJ546416

Dated: 2009-02-17 | Length: 1014 | CRC: 497934365

                
ID   FJ546416; SV 1; linear; genomic RNA; STD; VRL; 1014 BP.
XX
AC   FJ546416;
XX
DT   17-FEB-2009 (Rel. 99, Created)
DT   17-FEB-2009 (Rel. 99, Last updated, Version 1)
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DE   Arisaema potyvirus 2 isolate AR-12 polyprotein gene, partial cds.
XX
KW   .
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OS   Arisaema potyvirus 2
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus; unclassified Potyvirus.
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RN   [1]
RP   1-1014
RA   Pham K.T.K., Miglino R., van Schadewijk A.R., de Kock M.;
RT   "Nucleotide sequences of coat protein gene of potyviruses infecting
RT   Arisaema";
RL   Unpublished.
XX
RN   [2]
RP   1-1014
RA   Pham K.T.K., Miglino R., van Schadewijk A.R., de Kock M.;
RT   ;
RL   Submitted (12-DEC-2008) to the EMBL/GenBank/DDBJ databases.
RL   Applied Plant Research, Section Flower Bulbs and Nursery Stocks, Wageningen
RL   UR, Postbus 85, 2160 AB, Lisse, The Netherlands
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1014
FT                   /organism="Arisaema potyvirus 2"
FT                   /host="Arisaema"
FT                   /isolate="AR-12"
FT                   /mol_type="genomic RNA"
FT                   /country="Netherlands"
FT                   /collection_date="Aug-2008"
FT                   /db_xref="taxon:590743"
FT   CDS             <1. .815
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /protein_id="ACM89957.1"
FT                   /translation="NPPQPPNSTVIDAGKDPSKNKNENKNSAVIQHDATKTRDVGANTS
FT                   TLPRLNKISKMRMPMVRGKSLLNIGHLLEYKPEQTDLSNTRATRQQFSAWYDAVMREYE
FT                   VNSTQMELLMNGLMVWCIENGTSPNINGVWVMMEGDEQVEYPLKPVIENAKPTFRQIMH
FT                   HFSDAAEAYIEMRNAERPYMPRYGLQRNLRDKTLARYAFDFYEVTSRTTDRAREAHMQM
FT                   KAAALANVSSKLFGLDGNVATTSEDTERHTAMDVSTRMHTLMGVRQEP"
XX
SQ   Sequence 1014 BP; 341 A; 213 C; 228 G; 232 T; 0 other;

fj546416 Length: 1014  17-FEB-2009  Type: N  Check: 7897  ..

       1  aaaacccacc acaaccaccc aattcaacag tgattgatgc tggtaaggac
      51  ccaagcaaaa acaaaaatga aaataaaaat agcgcggtca ttcaacatga
     101  cgcgacaaaa acgagagatg tgggcgcaaa caccagtacg ctcccacgcc
     151  tcaacaaaat ttcaaaaatg aggatgccta tggtgcgtgg aaaatcactg
     201  ctcaacatag gacacctgct cgagtataaa ccagagcaaa cagatttatc
     251  aaacactcga gcaacaaggc aacaattctc tgcatggtat gatgcagtca
     301  tgcgagaata tgaagtgaac agcacacaaa tggagctgct tatgaatggg
     351  ctcatggtgt ggtgcattga gaatggcact tcaccaaaca ttaatggagt
     401  gtgggtcatg atggaaggtg atgaacaggt tgaatatcca ctcaaacctg
     451  ttatcgaaaa tgcgaaaccc acatttcgac aaattatgca tcatttctct
     501  gatgcagcag aagcttatat tgaaatgaga aatgctgaga gaccgtatat
     551  gcctagatac ggtctgcaga gaaatttaag agacaagacg ctagctcgat
     601  atgcatttga cttctatgag gtcacttccc ggacaactga ccgagcaagg
     651  gaagcacata tgcaaatgaa agcggcagcg cttgccaacg tttctagcaa
     701  gctatttggg cttgatggca acgttgcaac aacctctgaa gatactgaga
     751  ggcacacggc aatggacgtt tccacgagga tgcacacatt aatgggtgtg
     801  cgtcaggagc cgtgaatcac aacactgtgg atgttatctt tatgttttct
     851  gtacttgttt aagatatatt aacggacttg gtcagtgtgg ttttaccacg
     901  tagccgattt tatattacaa gtaaaatccg aggagctcac ctcaacacac
     951  ctttcacagt gatgttctac atcggaaagt ggtgcggaga ggacacatcc
    1001  ttaaaaaaaa aaaa