Sequence of DPV Barley yellow dwarf virus-MAV

Barley yellow dwarf virus isolate CZ-8334 coat protein gene, partial cds.

ACC No: FJ645749

Dated: 2010-02-19 | Length: 483 | CRC: 1526928652

                
ID   FJ645749; SV 1; linear; genomic RNA; STD; VRL; 483 BP.
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AC   FJ645749;
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DT   19-FEB-2010 (Rel. 103, Created)
DT   19-FEB-2010 (Rel. 103, Last updated, Version 1)
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DE   Barley yellow dwarf virus isolate CZ-8334 coat protein gene, partial cds.
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KW   .
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OS   Barley yellow dwarf virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Luteovirus.
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RN   [1]
RP   1-483
RA   Kundu J.K., Jarosova J., Gadiou S., Eervena G.;
RT   "Discrimination of three BYDV species by one-step RT-PCR-RFLP and sequence
RT   based methods in cereal plants from the Czech Republic";
RL   Cereal Res. Commun. 37(4):541-550(2009).
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RN   [2]
RP   1-483
RA   Kundu J.K.;
RT   ;
RL   Submitted (18-JAN-2009) to the EMBL/GenBank/DDBJ databases.
RL   Department of Virology, Crop Research Institute, Drnovska 507, Prague 6
RL   16106, Czech Republic
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FH   Key             Location/Qualifiers
FH
FT   source          1. .483
FT                   /organism="Barley yellow dwarf virus"
FT                   /host="Hordeum vulgare"
FT                   /isolate="CZ-8334"
FT                   /serotype="MAV"
FT                   /mol_type="genomic RNA"
FT                   /country="Czech Republic"
FT                   /db_xref="taxon:12037"
FT   CDS             <1. .>483
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ACO58392.1"
FT                   /translation="RAGAVRRMVVVQPNQAGPKQRTRRRTRGGGANLISRPAGRTEVFV
FT                   FSVNDLKANSSGTIKFGPDLSQCPALSGGILKSYHRYKITNVKVEFKSHASASTVSAMY
FT                   IELDTSCSQSTLGSYINSFTLSKSATKNFTAQQIDGKEFRESTVNQFYMLYKANGST"
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SQ   Sequence 483 BP; 146 A; 130 C; 107 G; 100 T; 0 other;

fj645749 Length: 483  19-FEB-2010  Type: N  Check: 2338  ..

       1  cgcgctggcg cagttcggag aatggttgtg gtccaaccca atcaagccgg
      51  accaaaacaa agaactcgtc gacgcacaag aggaggaggg gcaaatctta
     101  tatctagacc agcaggcagg actgaggtat tcgtattctc agtcaacgac
     151  cttaaggcca actcctcagg gacaatcaag ttcggtcccg acctttcgca
     201  atgcccagcg ctttcaggtg gaatactcaa gtcctaccac cgttacaaga
     251  tcacaaacgt caaggttgag tttaagtcac acgcgtccgc ctctacagtc
     301  agcgcaatgt atattgaact cgacacttcg tgctcacaat caaccttggg
     351  tagctacatt aactcattca ccctctcaaa atcagcaacc aaaaacttca
     401  ccgcccaaca gattgacggg aaggaattca gggagagcac ggtgaaccaa
     451  ttttacatgc tatacaaggc aaatggtagt acg