Sequence of DPV Barley yellow dwarf virus-MAV

Barley yellow dwarf virus isolate CZ-11103 coat protein gene, partial cds.

ACC No: FJ645751

Dated: 2010-02-19 | Length: 483 | CRC: 69850760

                
ID   FJ645751; SV 1; linear; genomic RNA; STD; VRL; 483 BP.
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AC   FJ645751;
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DT   19-FEB-2010 (Rel. 103, Created)
DT   19-FEB-2010 (Rel. 103, Last updated, Version 1)
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DE   Barley yellow dwarf virus isolate CZ-11103 coat protein gene, partial cds.
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KW   .
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OS   Barley yellow dwarf virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Luteovirus.
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RN   [1]
RP   1-483
RA   Kundu J.K., Jarosova J., Gadiou S., Eervena G.;
RT   "Discrimination of three BYDV species by one-step RT-PCR-RFLP and sequence
RT   based methods in cereal plants from the Czech Republic";
RL   Cereal Res. Commun. 37(4):541-550(2009).
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RN   [2]
RP   1-483
RA   Kundu J.K.;
RT   ;
RL   Submitted (18-JAN-2009) to the EMBL/GenBank/DDBJ databases.
RL   Department of Virology, Crop Research Institute, Drnovska 507, Prague 6
RL   16106, Czech Republic
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FH   Key             Location/Qualifiers
FH
FT   source          1. .483
FT                   /organism="Barley yellow dwarf virus"
FT                   /host="Triticum aestivum"
FT                   /cultivar="Rapsodia"
FT                   /isolate="CZ-11103"
FT                   /serotype="MAV"
FT                   /mol_type="genomic RNA"
FT                   /country="Czech Republic"
FT                   /db_xref="taxon:12037"
FT   CDS             <1. .>483
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ACO58394.1"
FT                   /translation="RAGAVRRMVVVQPNQAGPKRRTRRRTRGGGANLISGPAGRTEVFV
FT                   FSVNDLKANSSGTIKFGPDLSQCPALSGGILKSYHRYKITNVKVEFKSHASASTVGAMF
FT                   IELDTSCSQSTLGSYINSFTLSKSATKYFTAQQIDGKEFRECTVNQFYMLYKANGST"
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SQ   Sequence 483 BP; 139 A; 130 C; 110 G; 104 T; 0 other;

fj645751 Length: 483  19-FEB-2010  Type: N  Check: 5567  ..

       1  cgcgctggcg cagttcggag aatggttgtg gtccaaccca atcaagccgg
      51  accaaaacga agaactcgtc gacgcacaag aggaggaggg gcaaatctta
     101  tatctggacc agcaggcagg actgaggtat tcgtattctc agtcaacgac
     151  cttaaggcca actcctcagg gacaatcaag ttcggtcccg acctttcgca
     201  atgcccagcg ctttcaggtg gaatactcaa gtcctaccac cgttacaaga
     251  tcacaaacgt caaggttgag tttaagtcac acgcgtccgc ctctacagtc
     301  ggcgcaatgt ttattgaact tgacacttcg tgctcacaat caaccttggg
     351  tagctacatt aactcattca ccctctcaaa atcagcaacc aaatacttca
     401  ccgcccaaca gattgacggg aaggaattca gggagtgcac ggtgaaccaa
     451  ttttacatgc tatacaaggc caatggtagt acg