Sequence of DPV Barley yellow dwarf virus-MAV

Barley yellow dwarf virus isolate CZ-6219 coat protein gene, partial cds.

ACC No: FJ645760

Dated: 2010-02-19 | Length: 483 | CRC: -1478646769

                
ID   FJ645760; SV 1; linear; genomic RNA; STD; VRL; 483 BP.
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AC   FJ645760;
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DT   19-FEB-2010 (Rel. 103, Created)
DT   19-FEB-2010 (Rel. 103, Last updated, Version 1)
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DE   Barley yellow dwarf virus isolate CZ-6219 coat protein gene, partial cds.
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KW   .
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OS   Barley yellow dwarf virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Luteovirus.
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RN   [1]
RP   1-483
RA   Kundu J.K., Jarosova J., Gadiou S., Eervena G.;
RT   "Discrimination of three BYDV species by one-step RT-PCR-RFLP and sequence
RT   based methods in cereal plants from the Czech Republic";
RL   Cereal Res. Commun. 37(4):541-550(2009).
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RN   [2]
RP   1-483
RA   Kundu J.K.;
RT   ;
RL   Submitted (18-JAN-2009) to the EMBL/GenBank/DDBJ databases.
RL   Department of Virology, Crop Research Institute, Drnovska 507, Prague 6
RL   16106, Czech Republic
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FH   Key             Location/Qualifiers
FH
FT   source          1. .483
FT                   /organism="Barley yellow dwarf virus"
FT                   /host="Hordeum vulgare"
FT                   /isolate="CZ-6219"
FT                   /serotype="MAV"
FT                   /mol_type="genomic RNA"
FT                   /country="Czech Republic"
FT                   /db_xref="taxon:12037"
FT   CDS             <1. .>483
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ACO58402.1"
FT                   /translation="RDGAVRRMVVVQPNRAGPKRRTRRRTRGGGANLISGPAGRTEVFV
FT                   FSVNDLKANSSGTIKFGPDLSQCPALSGGILKSYHRYKITNVKVEFKSHASASTVGAMF
FT                   IELDTSCSQSTLGSYINSFTLSKSATKNFTAQQIDGKEFRESTVNQFYMLYKANGST"
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SQ   Sequence 483 BP; 143 A; 129 C; 110 G; 101 T; 0 other;

fj645760 Length: 483  19-FEB-2010  Type: N  Check: 3272  ..

       1  cgcgatggcg cagttcggag aatggttgtg gtccaaccca atcgagccgg
      51  accaaaacga agaactcgtc gacgcacaag aggaggaggg gcaaatctta
     101  tatctggacc agcaggcagg actgaggtat tcgtattctc agtcaacgac
     151  cttaaggcca actcctcagg gacaatcaag ttcggtcccg acctttcgca
     201  atgcccagcg ctttcaggtg gaatactcaa gtcctaccac cgttacaaga
     251  tcacaaacgt caaggttgag tttaagtcac acgcgtccgc ctctacagtc
     301  ggcgcaatgt ttattgaact cgacacttcg tgctcacaat caaccttggg
     351  tagctacatt aactcattca ccctctcaaa atcagcaacc aaaaacttca
     401  ccgcccaaca gattgacggg aaggaattca gggaaagcac ggtgaaccaa
     451  ttttacatgc tatacaaggc aaatggtagt acg