Sequence of DPV Barley yellow dwarf virus-PAS

Barley yellow dwarf virus isolate CZ-Cicovice coat protein gene, partial cds.

ACC No: FJ645764

Dated: 2010-02-19 | Length: 483 | CRC: -767980983

                
ID   FJ645764; SV 1; linear; genomic RNA; STD; VRL; 483 BP.
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AC   FJ645764;
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DT   19-FEB-2010 (Rel. 103, Created)
DT   19-FEB-2010 (Rel. 103, Last updated, Version 1)
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DE   Barley yellow dwarf virus isolate CZ-Cicovice coat protein gene, partial
DE   cds.
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KW   .
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OS   Barley yellow dwarf virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Luteovirus.
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RN   [1]
RP   1-483
RA   Kundu J.K., Jarosova J., Gadiou S., Eervena G.;
RT   "Discrimination of three BYDV species by one-step RT-PCR-RFLP and sequence
RT   based methods in cereal plants from the Czech Republic";
RL   Cereal Res. Commun. 37(4):541-550(2009).
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RN   [2]
RP   1-483
RA   Kundu J.K.;
RT   ;
RL   Submitted (18-JAN-2009) to the EMBL/GenBank/DDBJ databases.
RL   Department of Virology, Crop Research Institute, Drnovska 507, Prague 6
RL   16106, Czech Republic
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FH   Key             Location/Qualifiers
FH
FT   source          1. .483
FT                   /organism="Barley yellow dwarf virus"
FT                   /host="Hordeum vulgare"
FT                   /isolate="CZ-Cicovice"
FT                   /serotype="PAS"
FT                   /mol_type="genomic RNA"
FT                   /country="Czech Republic"
FT                   /db_xref="taxon:12037"
FT   CDS             <1. .>483
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ACO58406.1"
FT                   /translation="RRRAIRPVVVVQPNRAGPRRRNGRRAGRRGPDSIPGSAGRTEVFI
FT                   FSVDNLKANSSGTIKFGPSLSQCPALSDGILKSYHRYKITSIRVEFKSHASATTSGAIF
FT                   VELDTACKQSALGSYINSFTISKTASKSFRAEAINGKDFQESTIDQFWLLYKANGTT"
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SQ   Sequence 483 BP; 137 A; 134 C; 111 G; 101 T; 0 other;

fj645764 Length: 483  19-FEB-2010  Type: N  Check: 5136  ..

       1  cgccgtagag caattcggcc agtggttgtg gtccaaccca atcgagcagg
      51  acccagacga cgaaatggtc gacgcgcagg aagaagaggg ccagattcta
     101  tacctggatc agcaggcagg actgaggtat tcatattctc agtcgacaac
     151  cttaaagcca actcttccgg gacaatcaaa ttcggcccca gtctatcgca
     201  atgcccagcg ctttcagacg gaatacttaa gtcctaccac cgttacaaga
     251  tcacaagtat ccgtgttgag tttaagtcac acgcgtccgc cactacgtcg
     301  ggcgctatct ttgttgaact cgacaccgcg tgcaagcaat cagccctggg
     351  tagctacatt aattccttca ccatcagcaa aactgcctcc aaatccttca
     401  gagccgaggc gattaatggg aaggacttcc aagaatcaac gatagaccag
     451  ttctggctac tatacaaggc aaatgggaca act