Sequence of DPV Zucchini yellow mosaic virus

Zucchini yellow mosaic virus isolate Ker.Jir.W polyprotein gene, partial cds.

ACC No: FJ705265

Dated: 2009-03-11 | Length: 1006 | CRC: -856293449

                
ID   FJ705265; SV 1; linear; genomic RNA; STD; VRL; 1006 BP.
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AC   FJ705265;
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DT   11-MAR-2009 (Rel. 100, Created)
DT   11-MAR-2009 (Rel. 100, Last updated, Version 1)
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DE   Zucchini yellow mosaic virus isolate Ker.Jir.W polyprotein gene, partial
DE   cds.
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KW   .
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OS   Zucchini yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1006
RA   Massumi H., Shaabanian M., Heydarnejad J., Hosseini Pour A., Rahimian H.;
RT   "Biological characteristics and phylogenetic analysis of Iranian Zucchini
RT   yellow mosaic virus isolates";
RL   Unpublished.
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RN   [2]
RP   1-1006
RA   Massumi H., Shaabanian M., Heydarnejad J., Hosseini Pour A., Rahimian H.;
RT   ;
RL   Submitted (04-FEB-2009) to the EMBL/GenBank/DDBJ databases.
RL   Department of Plant Protection, Shahid Bahonar, Kerman University, Kerman,
RL   Iran
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1006
FT                   /organism="Zucchini yellow mosaic virus"
FT                   /host="Citrullus colocynthis (L.) Schrad."
FT                   /isolate="Ker.Jir.W"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran"
FT                   /db_xref="taxon:12232"
FT   CDS             <1. .841
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /note="coat protein"
FT                   /protein_id="ACN59464.1"
FT                   /translation="SGTQPTVADAGATKKDKEDDKGKNKDVTGSGSGEKTVAAATKDKD
FT                   VNAGSHGKIVPRLSKITKKMSLPRVKGNVILDIDHLLEYKPDQIELYNTRASHQQFASW
FT                   FNQVKTEYDLDEQQMGVVMNGFMVWCIENGTSPDINGVWVMMDGNEQVEYPLKPIVENA
FT                   KPTLRQIMHHFSDAAEAYIEMRNAEAPYMPRYGLLRNLRDRSLARYAFDFYEVNSKTPE
FT                   RAREAVAQMKAAALSNVSSRLFGLDGNVATTSEDTERHTARDVNRNMHTLLGVNTMQ"
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SQ   Sequence 1006 BP; 303 A; 193 C; 252 G; 258 T; 0 other;

fj705265 Length: 1006  11-MAR-2009  Type: N  Check: 6555  ..

       1  atcaggcact cagccaactg ttgcagatgc tggagctaca aagaaagaca
      51  aagaagatga caaagggaaa aacaaggacg ttacaggctc cggctcaggt
     101  gagaaaacag tagcagctgc cacgaaggac aaggatgtga atgctggttc
     151  tcatgggaaa attgtgccgc gtctttcgaa gatcacaaag aaaatgtcat
     201  tgccacgcgt gaaaggaaat gtgatactcg atattgatca tttgctggaa
     251  tataaaccgg atcaaattga gttatataac acacgagcgt ctcatcagca
     301  gttcgcctct tggttcaacc aggttaagac ggaatatgat ttggacgagc
     351  aacagatggg agttgtaatg aatggtttca tggtttggtg cattgaaaat
     401  ggcacttcac ccgacattaa cggagtgtgg gttatgatgg acggaaatga
     451  gcaagttgag tatcccttga aaccaatagt tgaaaatgca aagccaacgc
     501  tgcggcaaat aatgcatcat ttttcagatg cagcggaggc atatatagag
     551  atgagaaatg cagaggcacc atacatgccg aggtatggtt tgcttcgaaa
     601  tctacgggat aggagtttag cacgatatgc tttcgatttc tatgaagtca
     651  attctaaaac tcctgaaaga gcccgcgaag ctgttgcgca gatgaaagca
     701  gcagctctta gcaatgtttc ttcaaggttg tttggccttg atggaaatgt
     751  tgccaccact agcgaagaca ctgaacggca cactgcacgt gatgttaaca
     801  gaaacatgca caccttacta ggtgtgaata caatgcagta aagggtaggc
     851  cgcctaccta ggttattgtt tcgctgccga cgtaattcta atatttaccg
     901  ctttatttga tatctttaga tttccagagt gggcctccca cctttaaagc
     951  gttaagttta tgttagttgt ccaggagtgc cgtagtcctg tcggaagctt
    1001  tagtgt