Sequence of DPV Potato virus Y

Potato virus Y isolate xifeng coat protein gene, partial cds.

ACC No: FJ766534

Dated: 2009-03-03 | Length: 1062 | CRC: 1308956023

                
ID   FJ766534; SV 1; linear; genomic RNA; STD; VRL; 1062 BP.
XX
AC   FJ766534;
XX
DT   03-MAR-2009 (Rel. 100, Created)
DT   03-MAR-2009 (Rel. 100, Last updated, Version 1)
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DE   Potato virus Y isolate xifeng coat protein gene, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1062
RA   Liu X.L., Wu X.Q., Chen S.H.;
RT   "The analysis of the molecular variation of Potato virus Y of China";
RL   Unpublished.
XX
RN   [2]
RP   1-1062
RA   Liu X.L., Wu X.Q., Chen S.H., He H.Y., Hou Z.P., Zhu F.Y., Zhou Y.Y.;
RT   ;
RL   Submitted (18-FEB-2009) to the EMBL/GenBank/DDBJ databases.
RL   College of Bioengineering, Henan University of Technology, Lianhua Street,
RL   Zhengzhou, Henan 450001, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1062
FT                   /organism="Potato virus Y"
FT                   /host="potato"
FT                   /isolate="xifeng"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="17-Jun-2008"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .798
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="involved in aphid transmission, cell-to-cell and
FT                   systemic movement, encapsidation of the viral RNA and in
FT                   the regulation of viral RNA amplification"
FT                   /protein_id="ACN39194.1"
FT                   /translation="DTIDAGGSTKKDAKQEQGSIQPNLNKEKEKDVNVGTSGTHTVPRI
FT                   KAITSKMRMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVQLAYDIGET
FT                   EMPTVMNGLMVWCIENGTSPNINGVWVMMDGDEQVEYPLKPIVENAKPTLRQIMAHFSD
FT                   VAEAYIEMRNKKEPYMPRYGLVRNLRDGSLARYAFDFYEVTSRTPVRAREAHIQMKAAA
FT                   LKSAQSRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
XX
SQ   Sequence 1062 BP; 334 A; 191 C; 249 G; 288 T; 0 other;

fj766534 Length: 1062  03-MAR-2009  Type: N  Check: 7979  ..

       1  gacacaatcg atgcaggagg aagcactaag aaagatgcaa aacaagagca
      51  aggtagcatt caaccaaatc tcaacaagga aaaggaaaag gacgtgaatg
     101  ttggaacatc tggaactcac actgtgccac gaattaaagc tatcacgtcc
     151  aaaatgagaa tgcccaagag taagggtgca actgtactaa atttggaaca
     201  cttactcgag tatgctccac agcaaattga catctcaaat actcgagcaa
     251  ctcaatcaca gtttgataca tggtatgaag cagtacaact tgcatacgac
     301  ataggagaaa ctgaaatgcc aactgtgatg aatgggctta tggtttggtg
     351  cattgaaaat ggaacctcgc caaatatcaa tggagtttgg gttatgatgg
     401  atggagatga acaagtcgaa tacccactga aaccaatcgt tgagaatgca
     451  aaaccaacac ttaggcaaat catggcacat ttctcagatg ttgcagaagc
     501  gtatatagaa atgcgcaaca aaaaggaacc atatatgcca cgatatggtt
     551  tagttcgtaa tctgcgcgat ggaagtttgg ctcgctatgc ttttgacttt
     601  tatgaagtta catcacggac accagtgagg gctagagagg cacacattca
     651  aatgaaggcc gcagctttaa aatcagctca atctcgactt ttcggattgg
     701  atggtggcat tagtacacaa gaggaaaaca cagagaggca caccaccgag
     751  gatgtttctc caagtatgca tactctactt ggagtgaaga acatgtgatt
     801  gtagtgtctt tccggacgat atatagatat ttatgtttgc agtaagtatt
     851  ttggcttttc ctgtactact tttatcgtaa ttaataatcg tttgaatatt
     901  actggcagat aggggtggta tagcgattcc gtcgttgcag tgaccttagc
     951  tgtcgtttct gtattattat gtttgtataa aagtgccggg ttgttgttgt
    1001  tgtggctgat ctatcgatta ggtgatgttg cgattcgtcg tagcagtgac
    1051  tatgtctgga tc