Sequence of DPV Potato virus Y

Potato virus Y partial gene for polyprotein, coat protein region, genomic RNA

ACC No: FM200035

Dated: 2008-07-23 | Length: 801 | CRC: 1235083123

                
ID   FM200035; SV 1; linear; genomic RNA; STD; VRL; 801 BP.
XX
AC   FM200035;
XX
DT   23-JUL-2008 (Rel. 96, Created)
DT   23-JUL-2008 (Rel. 96, Last updated, Version 1)
XX
DE   Potato virus Y partial gene for polyprotein, coat protein region, genomic
DE   RNA
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-801
RA   Nguyen T.T.V.;
RT   ;
RL   Submitted (19-JUL-2008) to the EMBL/GenBank/DDBJ databases.
RL   Nguyen T.T.V., Genetics, ThaiNguyen University, Thai Nguyen, TanThinh, 84,
RL   VIET NAM.
XX
RN   [2]
RA   Nguyen T.T., Chu M.H., Nguyen T.V.T., Pham N.T.;
RT   "Cloning and sequencing of the coat protein of Potato virus Y from Thai
RT   Nguyen";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .801
FT                   /organism="Potato virus Y"
FT                   /specific_host="Solanum tuberosum cultivar
FT                   PhuBinh-ThaiNguyen"
FT                   /mol_type="genomic RNA"
FT                   /country="Viet Nam"
FT                   /tissue_type="leaf of Solanum tuberosum"
FT                   /virion
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .>801
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="CAQ86910.1"
FT                   /translation="ANDTIDAGESNKKDAKPEQGSIQSNLNKGKDKDVNAGTSGTHTVP
FT                   RIKAITSKMRMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDAWYEAVRMAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDENEQVEYPLKPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLIRNLRDVGLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
FT   mat_peptide     <1. .>801
FT                   /product="coat protein"
XX
SQ   Sequence 801 BP; 271 A; 161 C; 199 G; 170 T; 0 other;

fm200035 Length: 801  23-JUL-2008  Type: N  Check: 2933  ..

       1  gcaaatgaca caattgatgc aggagaaagc aacaagaaag atgcaaaacc
      51  agagcaaggc agcatccagt caaacctgaa caaaggaaaa gataaggatg
     101  tgaatgctgg tacatctggg acacatactg tgccgagaat caaggctatc
     151  acgtccaaaa tgagaatgcc caaaagcaag ggagcaaccg tgctaaattt
     201  agaacacttg cttgagtacg ctccacaaca aattgatatt tcaaatactc
     251  gggcaactca atcacagttt gatgcgtggt atgaggcagt gcggatggca
     301  tacgacatag gagaaactga gatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatt gaaaatggaa cctcgccaaa tgtcaacgga gtttgggtta
     401  tgatggatga gaatgaacaa gttgagtacc cgttgaaacc aatcgttgag
     451  aatgcaaaac caacccttag gcaaatcatg gcacatttct cagatgttgc
     501  agaagcgtat atagaaatgc gcaacaaaaa ggaaccatat atgccacgat
     551  atggtttaat tcgaaatctg cgggatgtgg gtttagcgcg ttatgccttt
     601  gacttttatg aagtcacatc acgaacacca gtgagggcta gggaagcgca
     651  cattcaaatg aaggccgcag cattgaaatc agcccaacct cgacttttcg
     701  ggttggacgg tggcatcagt acacaagagg agaacacaga gaggcacacc
     751  accgaggatg tctctccaag tatgcatact ctacttggag tcaagaacat
     801  g