Sequence of DPV Chilli leaf curl Multan alphasatellite

Cotton leaf curl Rajasthan virus satellite DNA 1, complete sequence

ACC No: FM202329

Dated: 2009-07-08 | Length: 1368 | CRC: -879394653

                
ID   FM202329; SV 1; circular; genomic DNA; STD; VRL; 1368 BP.
XX
AC   FM202329;
XX
DT   08-JUL-2009 (Rel. 101, Created)
DT   08-JUL-2009 (Rel. 101, Last updated, Version 1)
XX
DE   Cotton leaf curl Rajasthan virus satellite DNA 1, complete sequence
XX
KW   complete genome.
XX
OS   Cotton leaf curl Rajasthan virus satellite DNA 1
OC   Viruses; Satellites; unclassified Satellites;
OC   Begomovirus-associated DNA 1-like sequences.
XX
RN   [1]
RP   1-1368
RA   Mubeen M.;
RT   ;
RL   Submitted (08-JUL-2008) to the EMBL/GenBank/DDBJ databases.
RL   Mubeen M., Plant Biotechnology, NIBGE, P O Box 577, Jhang Road Faisalabad,
RL   Punjab, 38000, PAKISTAN.
XX
RN   [2]
RA   Mubeen M., Briddon R.W., Mansoor S.;
RT   "Diverse and recombinant DNA betasatellites are associated with a
RT   begomovirus disease complex on a weed host";
RL   Unpublished.
XX
CC   related entry; FM202328
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1368
FT                   /organism="Cotton leaf curl Rajasthan virus satellite DNA
FT                   1"
FT                   /host="Digera arvensis"
FT                   /mol_type="genomic DNA"
FT                   /isolation_source="host leaf"
FT                   /collected_by="Muhammad Mubeen"
FT                   /clone="Tan37"
FT                   /db_xref="taxon:551238"
FT   CDS             451. .1017
FT                   /transl_table=1
FT                   /gene="rep"
FT                   /product="Rep protein"
FT                   /protein_id="CAR47809.1"
FT                   /translation="MAEENPSVFRRVKAKLAEEEFQATVAEIQISNLKSWQLRLKTLLG
FT                   RDPDDRTIFWVYGPTGGEGKSTFARDLYRSGSWFYTTGGSADNVAYQYIGCLGNNIVFD
FT                   IPRDKRDYLQYSLIEMFKDRLIVSNKYEPLMAPLVNCIHVVVMSNFLPDFEKISIDRVH
FT                   VIPCTPCGVCLKHHIGEIKCEEYVD"
XX
SQ   Sequence 1368 BP; 393 A; 245 C; 312 G; 418 T; 0 other;

fm202329 Length: 1368  08-JUL-2009  Type: N  Check: 6086  ..

       1  accccgcctc ggcacccctc accttggaac ccccgtgcga taagcgtgcc
      51  tctctctcta aaaagaaaaa attatgcctg cggtcacgtc agtgttttgg
     101  tgtttcaccg tctatttcag tgcttctctc cctgatctgt gtgctgtgtt
     151  cgagaacaca cacgttagtt acgcctgctg gcaggaggaa gagtgtccga
     201  cgagcaagcg tcgtcatctg cagggttacc tgcaattgaa gggtaaacgt
     251  acccttaacc aggttaagtc gttgtttggt gacctgaatc cccatctgga
     301  gaaacagcgt gcacggagat cagatgatgc ccgtgattac tgtatgaagg
     351  aggaaactag ggtttccggt ccctttgaat ttggggatta ttgccctagt
     401  ggttcccaca ggcgcagaca acgggaactt gtaattagag tccggtaaga
     451  atggctgagg aaaatccgtc agtattccgg cgagttaagg ccaagcttgc
     501  tgaggaagaa ttccaggcta ctgtagctga aattcaaatt tcaaatttga
     551  aatcttggca actgcgcctg aagacgctcc ttgggaggga cccagatgac
     601  cgcactatct tctgggttta tggacccact ggtggtgaag gcaaatccac
     651  atttgccaga gatctgtaca gatctggatc ctggttctat accactggag
     701  gatctgcaga taatgtagct taccagtaca tagggtgttt aggaaataat
     751  attgtatttg atatccctcg tgataagagg gattatcttc agtatagttt
     801  aattgaaatg tttaaggata gattaatagt tagtaataag tatgagcctt
     851  taatggctcc gctagttaat tgtattcatg tagtagttat gtctaatttt
     901  ctccctgatt ttgagaagat tagcattgat agagtccatg taatcccttg
     951  tactccctgt ggtgtttgtc ttaaacatca cattggtgaa ataaaatgtg
    1001  aagaatacgt ggattaatta ttgtttttat atttatattt tgcttcttta
    1051  aaaaaagaag gaatgaaatg aaaaaaaaaa gaaatattat taataaaaca
    1101  gatagaatat attttaaaaa tctcaaggcc ccgcaggggc actctgttca
    1151  gattttgaaa taataaataa ataaatatat attgaaattg aatttaatca
    1201  aaacgacgtc gttttgctag ttttgactgg tcaaaaaagc agtcaggggt
    1251  ttaaagtgta aatatggtat tctttaggga ttatatgtgt caacatatgg
    1301  gttcctttgt ccttctgtat gcaatttttt gggttcctag ggtataaaac
    1351  cgaggcgggc atagtatt