Sequence of DPV Maize dwarf mosaic virus
Maize dwarf mosaic virus partial polyprotein, isolate Sz0812, genomic RNA
ACC No: FM883192
Dated: 2010-01-05 | Length: 1298 | CRC: -716341952
ID FM883192; SV 1; linear; genomic RNA; STD; VRL; 1298 BP.
XX
AC FM883192;
XX
DT 01-JUL-2009 (Rel. 101, Created)
DT 05-JAN-2010 (Rel. 103, Last updated, Version 2)
XX
DE Maize dwarf mosaic virus partial polyprotein, isolate Sz0812, genomic RNA
XX
KW .
XX
OS Maize dwarf mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1298
RA Petrik K.;
RT ;
RL Submitted (01-DEC-2008) to the EMBL/GenBank/DDBJ databases.
RL Petrik K., Department of Applied Genomics, Agricultural Research Institute,
RL Brunszvik u. 2, Martonvasar, 2462, HUNGARY.
XX
RN [2]
RA Petrik K., Sebestyen E., Gell G., Balazs E.;
RT "Natural insertions within the N-terminal region of the coat protein of
RT Maize dwarf mosaic potyvirus (MDMV) have an effect on the RNA stability";
RL Virus Genes 40(1):135-139(2010).
XX
FH Key Location/Qualifiers
FH
FT source 1. .1298
FT /organism="Maize dwarf mosaic virus"
FT /host="Zea mays convar. dentiformis"
FT /isolate="Sz0812"
FT /mol_type="genomic RNA"
FT /country="Hungary:Szeged"
FT /collection_date="05-Jun-2008"
FT /PCR_primers="fwd_name: MDMV8198fwd, fwd_seq:
FT aaaccggtggytrctygaartgc, rev_name: MDMV3, rev_seq:
FT atcctaggttttttttttttttttttttttttttttgtc"
FT /db_xref="taxon:12203"
FT CDS <1. .1064
FT /codon_start=3
FT /product="polyprotein"
FT /db_xref="GOA:C6GZ05"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="UniProtKB/TrEMBL:C6GZ05"
FT /protein_id="CAT99483.1"
FT /translation="LEMQPFANLAKEGLAPYIAESALRNLYTGAKVSEDELNIYARQFF
FT DDLSDYLADEVIDVKHQAGENVDAGQKTEAQKEAEKKAAEEKKAKEAEAKQKEAKEKTT
FT EKTGDGASAGKDKDVDAGTSGSVSVPKLKAMSKKMRLPQAKGKNILHLDFLLKYKPQQQ
FT DLSNTRATRAEFDRWYEAVQKEYELDDTQMTVVMSGLMVWCIENGCSPNINGVWTMMDG
FT DEQRTFPLKPVIENASPTFRQIMHHFSDAAEAYIEYRNSTERYMPRYGLQRNLTDFSLA
FT RYAFDFYEISSRTPARAKEAHMQMKAAAVRGSNTRMFGLDGNVGETQENTERHTAGDVS
FT RNIHSLLGVQQGH"
FT mat_peptide <1. .188
FT /product="NIb"
FT mat_peptide 189. .1061
FT /product="CP"
FT 3'UTR 1065. .1298
XX
SQ Sequence 1298 BP; 427 A; 248 C; 309 G; 314 T; 0 other;
fm883192 Length: 1298 05-JAN-2010 Type: N Check: 8058 ..
1 tactcgaaat gcaacctttt gccaacttgg caaaggaagg tttagcacca
51 tacatagccg agtcagccct tagaaaccta tacactggtg ctaaagtttc
101 agaagatgag ttgaatatct atgcacgaca gttctttgat gatctttcag
151 attatttggc tgacgaagtt atagatgtca aacatcaagc tggtgagaat
201 gttgatgctg ggcaaaagac tgaagcacag aaggaagcag agaagaaggc
251 agctgaggag aagaaagcaa aggaagctga ggctaaacaa aaagaagcca
301 aggagaaaac gactgagaaa actggtgacg gtgcgtccgc gggaaaagat
351 aaagacgtag atgctggaac ttcaggctca gtatcagtac ctaagttaaa
401 agccatgtcc aagaagatgc gcttgccaca agcgaaagga aagaatattc
451 ttcatcttga cttcctattg aaatacaagc cacaacaaca agacttatcg
501 aacacccgag caaccagagc tgaattcgat agatggtatg aagcagtgca
551 gaaagaatac gaacttgatg atacacaaat gacggttgtc atgagtggat
601 taatggtttg gtgcattgag aatggttgct caccgaacat caatggtgtc
651 tggacaatga tggacggaga cgaacagaga acatttcctt taaaaccagt
701 tattgaaaat gcatctccaa ctttcagaca aattatgcat cattttagtg
751 atgcagctga agcatacatt gaatatagaa attcaacaga aagatatatg
801 ccgagatatg gacttcagcg aaacttaacc gattttagcc ttgcacgcta
851 tgcatttgat ttttacgaga tatcatctcg aactccagca cgtgcaaagg
901 aagcccacat gcagatgaag gctgcagcag tccgtggttc aaacacacgg
951 atgtttggtc ttgatgggaa tgtcggagaa acccaagaaa atacagaacg
1001 ccatacagct ggcgacgtca gtcgcaacat acactccctc ttgggagttc
1051 agcaggggca ctgatacggg gttcaacttt tacgcagtaa tttagtaata
1101 tataagtaag ctattgtggt gaggttgtac ctcgttagtt ttatatatat
1151 attatgctac gtacctacta tgtctgcaag tgagtgaggt catacctcga
1201 cacttatagt aggcactatt actagcttcg aatcacgaga cggacgatcc
1251 attgagtggt tttaccacga ggatgcagcg agtttcgtgg tgagagcc