Sequence of DPV Maize dwarf mosaic virus
Maize dwarf mosaic virus partial polyprotein, isolate Sz0814, genomic RNA
ACC No: FM883194
Dated: 2010-01-05 | Length: 1298 | CRC: -927549776
ID FM883194; SV 1; linear; genomic RNA; STD; VRL; 1298 BP.
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AC FM883194;
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DT 01-JUL-2009 (Rel. 101, Created)
DT 05-JAN-2010 (Rel. 103, Last updated, Version 2)
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DE Maize dwarf mosaic virus partial polyprotein, isolate Sz0814, genomic RNA
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KW .
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OS Maize dwarf mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1298
RA Petrik K.;
RT ;
RL Submitted (01-DEC-2008) to the EMBL/GenBank/DDBJ databases.
RL Petrik K., Department of Applied Genomics, Agricultural Research Institute,
RL Brunszvik u. 2, Martonvasar, 2462, HUNGARY.
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RN [2]
RA Petrik K., Sebestyen E., Gell G., Balazs E.;
RT "Natural insertions within the N-terminal region of the coat protein of
RT Maize dwarf mosaic potyvirus (MDMV) have an effect on the RNA stability";
RL Virus Genes 40(1):135-139(2010).
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FH Key Location/Qualifiers
FH
FT source 1. .1298
FT /organism="Maize dwarf mosaic virus"
FT /host="Zea mays convar. dentiformis"
FT /isolate="Sz0814"
FT /mol_type="genomic RNA"
FT /country="Hungary:Szeged"
FT /collection_date="05-Jun-2008"
FT /PCR_primers="fwd_name: MDMV8198fwd, fwd_seq:
FT aaaccggtggytrctygaartgc, rev_name: MDMV3, rev_seq:
FT atcctaggttttttttttttttttttttttttttttgtc"
FT /db_xref="taxon:12203"
FT CDS <1. .1064
FT /codon_start=3
FT /product="polyprotein"
FT /db_xref="GOA:C6GZ07"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="UniProtKB/TrEMBL:C6GZ07"
FT /protein_id="CAT99485.1"
FT /translation="LEVQPFADLAKEGLAPYIAESALRNLYTGAKVSEDELNVYARQFF
FT DDLSDYLADEVIDVKHQAGENVDAGQKTEAQKEAEKKAAEEKKANEAEAKQKETKEKAT
FT EKTGDGGSTGKDKDVDAGTSGSVSVPKLKAMSKKMRLPQAKGKNILHLDFLLKYKPQQQ
FT DLSNTRATRAEFDRWYEAVQKEYELDDTQMTVVMSGLMVWCIENGCSPNINGVWTMMDG
FT DEQRTFPLKPVIENASPTFRQIMHHFSDAAEAYIEYRNSTERYMPRYGLQRNLTDFSLA
FT RYAFDFYEISSRAPARAKEAHMQMKAAAVRGSNTRMFGLDGNVGETQENTERHTAGDVS
FT RNIHSLLGVQQGH"
FT mat_peptide <1. .188
FT /product="NIb"
FT mat_peptide 189. .1061
FT /product="CP"
FT 3'UTR 1065. .1298
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SQ Sequence 1298 BP; 416 A; 255 C; 319 G; 308 T; 0 other;
fm883194 Length: 1298 05-JAN-2010 Type: N Check: 3040 ..
1 tacttgaagt gcaacctttt gctgatttgg caaaggaagg cttagcaccg
51 tacatagccg agtcagccct gagaaactta tatactggtg ctaaggtttc
101 agaggatgag ttgaatgtct atgcacgaca gttcttcgat gatctttcag
151 attatttggc tgatgaagtt atagatgtta aacatcaagc tggtgagaat
201 gtcgatgctg ggcagaaaac tgaagcacag aaggaagcag agaagaaggc
251 agctgaagag aagaaagcaa atgaggctga agccaagcag aaagaaacca
301 aagagaaagc aactgagaaa actggcgatg gcgggtccac aggaaaagat
351 aaagacgtgg acgctggaac ctcaggctca gtatcagtac ctaagctcaa
401 agccatgtcc aagaagatgc gtttacctca ggcaaaaggg aagaatatcc
451 ttcacctcga ctttctttta aaatacaagc cacaacaaca agacttatcg
501 aacacccgag caaccagggc tgaattcgat agatggtatg aagcagtgca
551 gaaagaatac gaacttgatg atacacaaat gacggttgtc atgagtggac
601 taatggtttg gtgcattgaa aatggttgct caccgaacat caatggtgtc
651 tggacaatga tggacggaga cgaacagaga acatttcctt taaaaccagt
701 tattgagaac gcatctccaa ctttcagaca aattatgcac cactttagtg
751 atgcagctga agcatacatt gaatatagga attcaacaga aagatatatg
801 ccgagatatg gacttcagcg aaacttaacc gactttagcc ttgcacgcta
851 tgcatttgat ttctacgaga tatcatctcg agctccagca cgtgcaaagg
901 aagcccacat gcagatgaag gctgcagcag tccgtggttc aaacacacgg
951 atgtttggtc ttgatgggaa tgtcggagaa acccaagaaa atacagaacg
1001 ccatacagct ggggacgtca gtcgcaacat tcattccctc ttgggagtcc
1051 agcaggggca ctgaaacggg gttcaacctt tacgcagtaa tttagtaata
1101 tataagtaag ctattgtggt gaggttatac ctcgttagtt ttatatatat
1151 attatgctac gtacctacta tgtctgcaag tgagtgaggt tatacctcga
1201 cacttatggt aggcactatt actagcttcg aatcacgaga cggacgatcc
1251 attgagtggt tttaccacga ggatgcagcg agtttcgtgg tgggggcc