Sequence of DPV Maize dwarf mosaic virus
Maize dwarf mosaic virus partial polyprotein, isolate Mv0702, genomic RNA
ACC No: FM883200
Dated: 2010-01-05 | Length: 1337 | CRC: 39149756
ID FM883200; SV 1; linear; genomic RNA; STD; VRL; 1337 BP.
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AC FM883200;
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DT 01-JUL-2009 (Rel. 101, Created)
DT 05-JAN-2010 (Rel. 103, Last updated, Version 2)
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DE Maize dwarf mosaic virus partial polyprotein, isolate Mv0702, genomic RNA
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KW .
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OS Maize dwarf mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1337
RA Petrik K.;
RT ;
RL Submitted (01-DEC-2008) to the EMBL/GenBank/DDBJ databases.
RL Petrik K., Department of Applied Genomics, Agricultural Research Institute,
RL Brunszvik u. 2, Martonvasar, 2462, HUNGARY.
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RN [2]
RA Petrik K., Sebestyen E., Gell G., Balazs E.;
RT "Natural insertions within the N-terminal region of the coat protein of
RT Maize dwarf mosaic potyvirus (MDMV) have an effect on the RNA stability";
RL Virus Genes 40(1):135-139(2010).
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FH Key Location/Qualifiers
FH
FT source 1. .1337
FT /organism="Maize dwarf mosaic virus"
FT /host="Zea mays convar. dentiformis"
FT /isolate="Mv0702"
FT /mol_type="genomic RNA"
FT /country="Hungary:Martonvasar"
FT /collection_date="11-Jun-2007"
FT /PCR_primers="fwd_name: MDMV8198fwd, fwd_seq:
FT aaaccggtggytrctygaartgc, rev_name: MDMV3, rev_seq:
FT atcctaggttttttttttttttttttttttttttttgtc"
FT /db_xref="taxon:12203"
FT CDS <1. .1103
FT /codon_start=3
FT /product="polyprotein"
FT /db_xref="GOA:C6GZ13"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="UniProtKB/TrEMBL:C6GZ13"
FT /protein_id="CAT99491.1"
FT /translation="LEMQPFSNLAKEGSAPYIAESALRNLYTGAKVSEDELNVYARQFF
FT DDLPNYLADEVIDVKHQAGENVDVGQKTEAQKEAEKKAAEEKKAKEAEAKQKENKEKTT
FT EKTGDGASTEKTTEKTGDGTSTGKDKDVDAGTSGSVSVPKLKAMSKKMRLPQAKGKNIL
FT HLDFLLKYKPQQQDLSNTRATRAEFDRWYEAVQKEYELDDTQMTVVMSGWMVWCIENGC
FT SPNINGVWTLMDGDEQRTFPLNPVIENAFPTFRQILHHFSDAAEAYIEYRNSTEKYMPR
FT YGFQRNLTDFSLARYAFDFYEISSRTPVRAKEAHMQMKAAAVRGSNTRMFGLDGNVGEA
FT HENTERHTAGDVSRNMHSLLGVQQGH"
FT mat_peptide <1. .188
FT /product="NIb"
FT mat_peptide 189. .1100
FT /product="CP"
FT 3'UTR 1104. .1337
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SQ Sequence 1337 BP; 435 A; 266 C; 314 G; 322 T; 0 other;
fm883200 Length: 1337 05-JAN-2010 Type: N Check: 4807 ..
1 tgcttgaaat gcaacctttt tctaacttgg caaaggaagg ctcagctcca
51 tacatagccg aatcagcttt aagaaactta tacactggcg ctaaagtttc
101 agaagacgaa ttaaacgtct acgcacgaca attctttgac gaccttccaa
151 actatttagc agatgaagtt atagatgtca aacatcaagc tggtgagaat
201 gttgacgtcg gacagaagac cgaagcgcag aaggaggccg aaaagaaagc
251 agctgaagaa aagaaagcaa aggaagctga ggccaaacag aaagaaaata
301 aggagaaaac aactgagaaa actggtgatg gtgcttccac agagaaaaca
351 actgagaaaa ctggtgatgg cacatccaca ggaaaggata aggacgtgga
401 tgctggaact tcgggttcgg tgtcagtacc taaactcaaa gccatgtcta
451 agaagatgcg tctacctcag gcaaagggaa agaacattct tcatcttgat
501 ttcctcctga aatataaacc acaacaacaa gatttatcaa acacccgagc
551 aaccagggct gaatttgata gatggtatga agcagtacag aaagaatacg
601 aacttgacga tacccaaatg acagttgtca tgagtggatg gatggtttgg
651 tgtattgaaa acggttgctc accgaacatc aatggtgtct ggaccctgat
701 ggatggagat gaacagagaa catttccttt aaacccagtt attgagaatg
751 catttccaac tttcagacaa attttgcatc attttagtga tgcagctgaa
801 gcgtatatcg agtatagaaa ctcaacagag aaatatatgc cgagatatgg
851 atttcaacgc aacttaaccg actttagcct tgcacgttat gcattcgatt
901 tttatgagat atcatctcga actccagtgc gtgcaaagga agcccacatg
951 cagatgaagg cagcagcagt ccgcggttca aacacacgga tgttcggtct
1001 tgacgggaat gttggagaag cccacgaaaa tacagaacgc cacacagctg
1051 gcgacgtcag tcgcaatatg cactcccttt tgggagttca gcagggccac
1101 tgatacgggg tttaactttt acgcagtaat ttagtaatat atacgtaagc
1151 tattttggtg aggttttacc tcgttagttt tatatatata ttatgctacg
1201 tacctactat gtctgcaagt gagtggggtt acacctcgac acttatagta
1251 ggcactatta ctagcttcga atcacgagac ggacgatccg ttgagtggtt
1301 ctaccacgag gatgcagcga gtttcgtggt aagggcc