Sequence of DPV Maize dwarf mosaic virus
Maize dwarf mosaic virus partial polyprotein, isolate Mv0704, genomic RNA
ACC No: FM883201
Dated: 2010-01-05 | Length: 1298 | CRC: -1237638033
ID FM883201; SV 1; linear; genomic RNA; STD; VRL; 1298 BP.
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AC FM883201;
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DT 01-JUL-2009 (Rel. 101, Created)
DT 05-JAN-2010 (Rel. 103, Last updated, Version 2)
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DE Maize dwarf mosaic virus partial polyprotein, isolate Mv0704, genomic RNA
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KW .
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OS Maize dwarf mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1298
RA Petrik K.;
RT ;
RL Submitted (01-DEC-2008) to the EMBL/GenBank/DDBJ databases.
RL Petrik K., Department of Applied Genomics, Agricultural Research Institute,
RL Brunszvik u. 2, Martonvasar, 2462, HUNGARY.
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RN [2]
RA Petrik K., Sebestyen E., Gell G., Balazs E.;
RT "Natural insertions within the N-terminal region of the coat protein of
RT Maize dwarf mosaic potyvirus (MDMV) have an effect on the RNA stability";
RL Virus Genes 40(1):135-139(2010).
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FH Key Location/Qualifiers
FH
FT source 1. .1298
FT /organism="Maize dwarf mosaic virus"
FT /host="Zea mays convar. dentiformis"
FT /isolate="Mv0704"
FT /mol_type="genomic RNA"
FT /country="Hungary:Martonvasar"
FT /collection_date="11-Jun-2007"
FT /PCR_primers="fwd_name: MDMV8198fwd, fwd_seq:
FT aaaccggtggytrctygaartgc, rev_name: MDMV3, rev_seq:
FT atcctaggttttttttttttttttttttttttttttgtc"
FT /db_xref="taxon:12203"
FT CDS <1. .1064
FT /codon_start=3
FT /product="polyprotein"
FT /db_xref="GOA:C6GZ14"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="UniProtKB/TrEMBL:C6GZ14"
FT /protein_id="CAT99492.1"
FT /translation="LEVQPFADLAKEGLAPYIAESALRNLYTGAKVSEDELNVYARQFF
FT DDLSDYLADEVIDVKHQAGENVDAGQKTEAQKEAEKKAAEEKKAKEAEAKQKETKEKAT
FT EKTGDGGSTGKDKDVDAGTSGSVSVPKLKAMSKKMRLPQAKGKNILHLDFLLKYKPQQQ
FT DLSNTRATRAEFDRWYEAVQKEYELDDTQMTVVMSGLMVWCIENGCSPNINGVWTMMDG
FT DEQRTFPLKPVIENASPIFRQIMHHFSDAAEAYIEYRNSTERYMPRYGLQRNLTDFSLA
FT RYAFDFYEISSRTPARAKEAPMQMKAAAVRGSNTRMFGLDGNVGETQENTERHPAGDVS
FT RNIHSLLGVQQGH"
FT mat_peptide <1. .188
FT /product="NIb"
FT mat_peptide 189. .1061
FT /product="CP"
FT 3'UTR 1065. .1298
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SQ Sequence 1298 BP; 418 A; 257 C; 316 G; 307 T; 0 other;
fm883201 Length: 1298 05-JAN-2010 Type: N Check: 886 ..
1 tgcttgaagt gcaacctttt gctgatttgg caaaggaagg cttagcacca
51 tacatagccg agtcagccct gagaaacttg tatactggtg ctaaggtttc
101 agaggatgaa ttgaatgtct atgcacgaca gttcttcgat gatctttcag
151 attatttggc tgacgaagtt atagatgtta aacatcaagc tggtgagaat
201 gtcgatgctg ggcagaaaac cgaagcacaa aaggaagctg agaagaaggc
251 agctgaagag aagaaagcaa aagaggctga agccaagcaa aaagaaacta
301 aagagaaagc aactgagaaa actggcgatg gcgggtccac aggaaaagat
351 aaagacgtgg acgctggaac ctcaggctca gtatcagtac ctaagctcaa
401 agccatgtcc aagaagatgc gtttacctca ggcaaaaggg aagaacatcc
451 ttcacctcga ctttctttta aaatacaagc cacaacaaca agacttatcg
501 aacacccgag caaccagggc tgaattcgat agatggtatg aagcagtgca
551 gaaagaatac gaacttgatg atacacaaat gacggttgtc atgagtggac
601 taatggtttg gtgcattgaa aatggttgct caccgaacat caatggtgtc
651 tggacaatga tggacggaga cgaacagaga acatttcctt taaaaccagt
701 tattgagaat gcatctccaa ttttcagaca aatcatgcac cactttagtg
751 atgcagctga agcatacatt gaatatagga attcaacaga aagatatatg
801 ccgagatatg gacttcagcg aaacttaacc gactttagcc ttgcacgcta
851 tgcatttgat ttttacgaga tatcatctcg aactccagca cgtgcaaagg
901 aagcccccat gcagatgaag gctgcagcag tacgtggttc aaacacacgg
951 atgtttggtc ttgatgggaa cgtcggagaa acccaagaaa atacagagcg
1001 ccacccagct ggtgacgtta gtcgcaacat acactccctc ttgggagttc
1051 agcaggggca ctgaaacggg gttcgacctt tacgcagtaa tttagtaata
1101 tataagtaag ctattgtggt gaggttatac ctcgttagtt ttatatatat
1151 attatgctac gtacttacta tgtctgcaag tgagtgaggt catacctcga
1201 cacttatagt aggcactatt actagcttcg aatcacgaga cggacgatcc
1251 attgagtggt tttaccacga ggatgcagcg agtttcgtgg tgggggcc