Sequence of DPV Soil-borne cereal mosaic virus

Soil-borne cereal mosaic virus cp gene for coat protein, host Triticum aestivum cv. Cezanne, country France

ACC No: FN298365

Dated: 2009-04-10 | Length: 651 | CRC: 1336610738

                
ID   FN298365; SV 1; linear; genomic RNA; STD; VRL; 651 BP.
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AC   FN298365;
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DT   10-APR-2009 (Rel. 100, Created)
DT   10-APR-2009 (Rel. 100, Last updated, Version 1)
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DE   Soil-borne cereal mosaic virus cp gene for coat protein, host Triticum
DE   aestivum cv. Cezanne, country France
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KW   .
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OS   Soil-borne cereal mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Furovirus.
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RN   [1]
RP   1-651
RA   Bragard C.;
RT   ;
RL   Submitted (28-JAN-2009) to the EMBL/GenBank/DDBJ databases.
RL   Bragard C., Unite de phytopathologie, Universite catholique de Louvain,
RL   Croix du Sud, 2 bte3, 1348 Louvain-la-Neuve, BELGIUM.
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RN   [2]
RA   Vaianopoulos C., Legreve A., Lorca C., Moreau V., Wattiez M., Bragard C.;
RT   "Detection of Soil-borne cereal mosaic virus in Belgium on wheat and
RT   barley";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .651
FT                   /organism="Soil-borne cereal mosaic virus"
FT                   /segment="RNA-2"
FT                   /host="Triticum aestivum cv. Cezanne"
FT                   /mol_type="genomic RNA"
FT                   /country="France:Chambon-sur-Cisse"
FT                   /isolation_source="host leaves"
FT                   /db_xref="taxon:100887"
FT   CDS             1. .651
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="CAX65640.1"
FT                   /translation="MDKLTRLKGEVDRSLQKAADKVTAESTESLQSKVVVQLPQMAVKN
FT                   GYTGYNKELNLMASIHPFIRLGTLISQIEGWQATRASILTHLGVMLNGVSKLGERNFFS
FT                   RQKRFGTHTQDGDEIFCDLGGEAVMQIITRLTVSLQSAKGEGSQTRNAKRGTTPTTNQV
FT                   EGEEQGQTDQTLAISNALAEFMTFIHTKDFTTNECYTQDSFEAKFNLKWEGTS"
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SQ   Sequence 651 BP; 200 A; 122 C; 166 G; 163 T; 0 other;

fn298365 Length: 651  10-APR-2009  Type: N  Check: 7831  ..

       1  ctggataagc ttacgagact taaaggtgag gtcgacaggt ccttacaaaa
      51  ggctgcggat aaggtcactg ctgaaagtac tgaatcgtta caatcgaaag
     101  tggttgtgca gttacctcaa atggctgtca agaacggtta tacgggttac
     151  aacaaggaat tgaatttgat ggcatctatt catcctttca ttaggctggg
     201  tactttgata agtcagattg agggatggca agcaacacga gctagcatac
     251  ttacccattt aggtgtaatg ctcaacggtg ttagtaagtt aggtgagcga
     301  aatttcttct ctagacagaa aagatttggg acacacactc aggacggtga
     351  cgagatattt tgtgaccttg gaggtgaggc agttatgcaa atcatcacca
     401  gactcacagt atcactacaa tccgcgaagg gtgagggttc ccagaccaga
     451  aatgctaaga gagggacgac gccgactacc aaccaagttg agggtgagga
     501  acaaggtcaa actgatcaga cgttagccat ttcgaatgcg ctggctgaat
     551  ttatgacttt catccacact aaagatttca cgacgaatga gtgttacacg
     601  caagactctt ttgaagccaa atttaatttg aagtgggaag gtacgagttg
     651  a