Sequence of DPV Ipomoea yellow vein virus
Sweet potato leaf curl Bengal virus - [India:West Bengal:2008] segment A, complete sequence
ACC No: FN432356
Dated: 2010-03-16 | Length: 2823 | CRC: -541381355
ID FN432356; SV 2; linear; genomic DNA; STD; VRL; 2823 BP.
XX
AC FN432356;
XX
DT 17-SEP-2009 (Rel. 102, Created)
DT 16-MAR-2010 (Rel. 104, Last updated, Version 4)
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DE Sweet potato leaf curl Bengal virus - [India:West Bengal:2008] segment A,
DE complete sequence
XX
KW .
XX
OS Sweet potato leaf curl Bengal virus - [India:West Bengal:2008]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RC revised by [3]
RA Tarafdar J.;
RT ;
RL Submitted (21-JUL-2009) to the EMBL/GenBank/DDBJ databases.
RL AICRP on Tuber Crops, Directorate of Research, BCKV, Kalyani, West Bengal,
RL INDIA.
XX
RN [2]
RA Kumar M., Tarafdar J.;
RT "Complete nucleotide sequence of DNA segment A of sweet potato leaf curl
RT virus isolate from India (SPLCV-BCKV) and its relationship with allied
RT members of the Begomoviruses";
RL Unpublished.
XX
RN [3]
RP 1-2823
RA Tarafdar J.;
RT ;
RL Submitted (23-FEB-2010) to the EMBL/GenBank/DDBJ databases.
RL AICRP on Tuber Crops, Directorate of Research, BCKV, Kalyani, West Bengal,
RL INDIA.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2823
FT /organism="Sweet potato leaf curl Bengal virus -
FT [India:West Bengal:2008]"
FT /segment="A"
FT /host="Ipomoea batatas"
FT /isolate="SPLCV-BCKV-India"
FT /mol_type="genomic DNA"
FT /country="India:West Bengal"
FT /db_xref="taxon:693893"
FT CDS 131. .472
FT /gene="AV2"
FT /product="AV2 protein"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="UniProtKB/TrEMBL:C8ZKV6"
FT /protein_id="CBE66547.1"
FT /translation="MDLWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELCS
FT ELIRIFRVRQYDRANSRFAEISSIWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFK
FT KRPDEEKEG"
FT CDS 297. .1061
FT /gene="AV1"
FT /product="AV1 protein"
FT /db_xref="GOA:C8ZKV7"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:C8ZKV7"
FT /protein_id="CBE66548.1"
FT /translation="MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV
FT PVSRSVQMKRRKGDRIPKGCVGPCKVQDYEFKMDVPHTGTFGCVSDFTRGTGLTHRLGK
FT RACIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFAQAFTMYDNEPTTA
FT KIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALVRKFFKSLSKHVTFNHKEEAKYENHLE
FT NALMLYSASSHASNPVYQTLRCRAYFCDSPKN"
FT CDS complement(1078. .1515)
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /protein_id="CBE66549.2"
FT /translation="MDSRTGESLSHAQTMRAVEFFTNPMSVGQTAPFHLRLMYVHTNNL
FT NRRPVIKMQLQVNHRNRREIGFQKIFLQFRIITTRLTGVIPSWTGISNRLKWRICNELA
FT NLGFFSLVNLVFVIKYLPRVCSWIDEVDTVDCNDDVKILLY"
FT CDS complement(1229. .1678)
FT /gene="AC2"
FT /product="AC2 protein"
FT /db_xref="GOA:C8ZKV8"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:C8ZKV8"
FT /protein_id="CBE66550.2"
FT /translation="MSNLPSGIKRKCPIQEPLHAEAKKAKRKVPEPRTRIVWKACGCSV
FT FITQACKYQHGFTHRGITKSCSDYESSRVLHQPHVCGSDCSISSTVDVCPYQQPQQKAG
FT HQDAASSQPPEQEGNWIPEDIPPIPDHNNASDWCYSQLDWYFQSP"
FT CDS complement(1587. .2684)
FT /gene="AC1"
FT /product="AC1 protein"
FT /db_xref="GOA:C8ZKV9"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProtKB/TrEMBL:C8ZKV9"
FT /protein_id="CBE66551.2"
FT /translation="MSVSKWLLPNVLKSKPKITSLLILAVRGLPSPTPKYTNTQQQKIY
FT TRSKRTARGWGTSPHGVGAVRRQIRLHKFQILRSGLTEQIESFPPNMPGSKSSSDVKSY
FT VDKDGDTLTWGEFQIDGRFARGGQQTANDAAAEALNAGSKETALQIIREKLPEKFLFQY
FT HNLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEG
FT PSRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKD
FT WQSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSP
FT FWNQEEVSHSGATARRGEEGQEESS"
FT CDS complement(2267. .2506)
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="GOA:C8ZKW0"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:C8ZKW0"
FT /protein_id="CBE66552.1"
FT /translation="MVLVQFEGKFVCTNSRFFDLVSPNRSNPFPPTCQGVNPRPMSSPT
FT LTRTGIPSHGVNSRSTADLLEEVSRLLMTQPQRL"
XX
SQ Sequence 2823 BP; 751 A; 585 C; 670 G; 817 T; 0 other;
fn432356 Length: 2823 16-MAR-2010 Type: N Check: 89 ..
1 taatattacc ggtgcccgcc gcgccctttt gcgggcccca cagttgggga
51 ccacgcgtct ttagttttaa gtctttaatg atgacttcac tttaaataga
101 ccaatcctgt tgcagtcttg gtcgccaagt atggatttgt gggacccact
151 tcagaaccca ctcccagata ctttatacgg ttttcggtgt atgctttctg
201 taaaatacct gcaaggtatt ttgaagaaat acgagccagg aaccctaggg
251 ttcgagctct gttcggaatt aattcgtatc ttcagggtca ggcagtatga
301 cagggcgaat tcccgtttcg cggagatttc atccatatgg ggggagaccg
351 gtaagacgga ggctgaactt cgagacagct atcgtgccct acactgggaa
401 tgctgtccca attgctgccc gaagctatgt cccggtttca agaagcgtcc
451 agatgaagag aaggaagggt gatcgcattc cgaagggatg cgtgggtcct
501 tgtaaggtac aggattacga attcaagatg gatgtcccac acactgggac
551 ctttggatgt gtgtctgatt tcactagggg aactgggctt acccatcgtt
601 tgggtaagag ggcgtgtatt aagtccatgg gtattgatgg taaggtttgg
651 atggacgaca atgtcgccaa gagggaccac accaacatca ttacttactg
701 gttgatccga gataggagac ccaataagga tcctttgacg tttgcacagg
751 cctttactat gtatgataat gagcccacta ctgctaagat ccgaatggat
801 ctgagagata gaatgcaggt cttgaagaaa ttctctgtta ctgtgtctgg
851 tgggccctat agccacaagg agcaggcgtt agttaggaag ttttttaaga
901 gtttgtcaaa acatgttact tttaatcata aggaggaagc taagtatgag
951 aatcatttag agaatgcatt aatgttgtat tctgctagca gtcatgctag
1001 caatcctgta tatcagaccc tgcgttgcag ggcttatttt tgtgattcgc
1051 ccaaaaatta ataagaatta tattttatta atagagtaat atcttgacat
1101 catcattaca atctaccgta tctacttcat ctatccaaga acaaactctt
1151 ggaagatatt taataacaaa aactaaatta actaaactaa aaaaccctaa
1201 atttgctaat tcattacata tgcgccattt aaggcgattg gaaataccag
1251 tccaactggg aataacacca gtcagacgcg ttgttatgat ccggaattgg
1301 aggaatatct tctggaatcc aatttccctc ctgttccggt ggttgacttg
1351 aagctgcatc ttgatgaccg gccttctgtt gaggttgttg gtatggacat
1401 acatcaaccg tagatgaaat ggagcagtct gacccacaga catggggttg
1451 gtgaagaact ctactgctct catagtctga gcatgactta gtgattcccc
1501 tgtgcgtgaa tccatgctgg tacttgcagg cttgggtgat gaagactgaa
1551 cagccgcaag ctttccacac tatcctagtc ctcggctcag gaactttcct
1601 cttggccttc ttcgcctctg cgtgcagtgg ctcctgaatg ggacacttcc
1651 tcttgattcc agaagggaga ttggacatcg cagaatatag cgtttgctgt
1701 tgcccaattc ttgagtgctc cttgctctgg tttgtccaac cagagtttaa
1751 atgaggaacc ctctcctgga ttgcagagga agatagtggg aattccgcct
1801 ttaatttgaa ctggctttcc gtatttacag ttggattgcc agtccttctg
1851 ggcccccatg aattccttaa agtgctttag gtattggggg ttgacgtcat
1901 caatgacgtt ataccaagca ctgttgctgt aaacttttgg gcttaaatct
1951 aaatgcccac acaagtaatt gtgagggccc aaagacctgg cccatactgt
2001 ttttcctatt ctgcttgggc cttcaataac aatggatatg ggtctatccg
2051 gccgcgcagc ggaatccatg acattttcag cggcccagtc gctgataatg
2101 tcaggaacgg cattgaaaga agaagaagaa aaaggagaag aatatacaga
2151 aggaggaggt gaaaaaatcc tatctaaatt agaaactaaa ttatgatatt
2201 gaaataaaaa tttttcagga agtttctccc tgattatttg caacgcagtt
2251 tctttagaac ctgcgtttag agcctctgcg gctgcgtcat tagcagtctg
2301 ctgacctcct ctagcaaatc tgccgtcgat ctggaattca ccccatgtga
2351 gggtatcccc gtccttgtca acgtaggact tgacatcgga cgaggattta
2401 ctccctggca tgttgggggg aaaggattcg atctgttcgg tgagaccaga
2451 tcgaagaatc tggaatttgt gcagacgaat ttgccttcga actgcaccaa
2501 caccatgagg tgaggttccc catcctcgtg cagttctctt gctacgtgta
2551 tatatttttt gttgctgggt gtttgtatat ttaggagttg ggctaggcag
2601 tcctcttaca gcgaggataa gtaatgaagt aatttttggc ttggatttta
2651 aaacgtttgg gaggagccat ttggagacac tcataagttt aaatgaattg
2701 gagactggag acaatatata ctatgtctcc aaatggcatt ttggtaattt
2751 aaagatcctt ctagctttaa ttcaaattcc gacaactctg ggaccaccaa
2801 aaggcgggca ccgtattaat att