Sequence of DPV Abutilon mosaic Brazil virus
Abutilon Brazil virus DNA A segment, complete sequence
ACC No: FN434438
Dated: 2010-05-09 | Length: 2653 | CRC: 1068349838
ID FN434438; SV 1; circular; genomic DNA; STD; VRL; 2653 BP.
XX
AC FN434438;
XX
DT 09-MAY-2010 (Rel. 104, Created)
DT 09-MAY-2010 (Rel. 104, Last updated, Version 1)
XX
DE Abutilon Brazil virus DNA A segment, complete sequence
XX
KW complete genome.
XX
OS Abutilon Brazil virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2653
RA Paprotka T.;
RT ;
RL Submitted (07-AUG-2009) to the EMBL/GenBank/DDBJ databases.
RL Paprotka T., University of Stuttgart, Molecular Biology and Virology of
RL Plants, Pfaffenwaldring 57, 70550 Stuttgart, GERMANY.
XX
RN [2]
RA Paprotka T., Metzler V., Jeske H.;
RT "The complete nucleotide sequence of a new bipartite begomovirus from
RT Brazil infecting Abutilon";
RL Arch. Virol. 155(5):813-816(2010).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2653
FT /organism="Abutilon Brazil virus"
FT /segment="DNA A"
FT /host="Abutilon sp."
FT /mol_type="genomic DNA"
FT /country="Brazil:Bahia"
FT /lat_lon="13.38 S 38.92 W"
FT /collection_date="06-Nov-2007"
FT /db_xref="taxon:665102"
FT CDS 230. .985
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="CBA13346.1"
FT /translation="MPKRDAPWRLMAGTSKISRSSNTGPRGGSGPKFNKANEWVNRPMY
FT RKPRIYRAFRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDITRGNGITHRVGKRF
FT CVKSVYILGKVWMDENIKLKNHTNSCMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT KNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL
FT LLYMACTHASNPVYATLKIRIYFYDSITN"
FT CDS complement(982. .1380)
FT /gene="AC3"
FT /product="replication enhancer"
FT /protein_id="CBA13347.1"
FT /translation="MDSRTGELITARQVENGVYIWEITNPLYFKMYRVEDPPYTRTRVY
FT HIQIRFNHNLRRALGLHKAFLNFQVWTTSLTASGKTYLARFKHLVMLYLEQLGVIALNN
FT VIRAVRFATDKSYVNHVLENHSIKFKFY"
FT CDS complement(1127. .1516)
FT /gene="AC2"
FT /product="transcriptional regulator"
FT /protein_id="CBA13348.1"
FT /translation="MLNSSSSTPPSIKPRHRIAKKRAIRRRRIDLDCGCSIYQHLNCTG
FT HGFTHRGTHHCTSGREWRLYLGDNKSPVFQDVQGRGSTVHSDKSVPHPDKVQPQPQESI
FT GSPQGIPELPSLDDFSDSFWEDLFS"
FT CDS complement(1428. .2570)
FT /gene="AC1"
FT /product="replication associated protein"
FT /protein_id="CBA13349.1"
FT /translation="MTEVESSPGVLGWSPEHKFTNMPRLPHSFRLQARNIFLTYPRCDI
FT PKDEALQMLQALPWAVVQPTYIRVAREEHSDGNPHLHCLIQLSGKSNIKDARFFDFTHP
FT RRSASFHPNVQAAKDTVAVRNYITKDGDYCESGQYKVSGGTKANKDDVFHNAVNAGGVS
FT EALEIIRAGDPKSFIVQHHNIRSNLEKIFTKAPEPWAPPFPLSSFTNVPEEMQEWADDY
FT FGRGSAARPIRPISLIVEGDSRTGKTMWARALGPHNYLSGHLDFNSRVYSNQVEYNVID
FT DVSPQYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKQ
FT ENSSLKAWTIHNAKFIFLNSPLYQTTTQDCEEESNQTTTN"
FT CDS complement(2006. .2428)
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="CBA13350.1"
FT /translation="MKLFKCFKPFHGQSSNLPISESHVRNTPMETPIYTVSYNYQGSPT
FT SRMQDFSTLLTPDGQPVFTQTCKLPKTPLPSGTTSPKMVTIVNPDNTKCLGVPRPTRTM
FT SSTTPSMQEVFQRLLKLSEPEIQSHSSSNTITSAPT"
XX
SQ Sequence 2653 BP; 650 A; 604 C; 659 G; 740 T; 0 other;
fn434438 Length: 2653 09-MAY-2010 Type: N Check: 3309 ..
1 accggatggc cgcgcgattt ttttaacccc ccacgtggcg cattcctggt
51 cgcgcgatcc ccctcccccg cgcgcttctc tcctttaatt ttaattaaag
101 tgcctaactt tctactgagc caatcatatt gcgcctgacg agtctagata
151 tgtgggaaag acttgggccc taagttgttg attaacggct ataaattaaa
201 ggaagactgg tcacagtctt taattcaaga tgcctaagcg ggatgcccct
251 tggcgcctta tggcgggaac ttcgaagatt agccgttcct ctaataccgg
301 ccctcgtgga ggttctgggc ctaaattcaa taaggccaat gagtgggtca
351 acaggccaat gtacaggaag cccaggatat accgggcctt cagaactcca
401 gatgtccctc gagggtgtga agggccttgc aaggtccagt cgtacgaaca
451 gcgacacgac atctcacatg tcggcaaggt catgtgtata tctgatatca
501 cccgaggtaa cggtattact caccgtgtgg gtaagcgctt ctgtgttaag
551 tctgtgtata ttttaggtaa ggtatggatg gacgagaata tcaagctcaa
601 gaaccacacg aacagttgca tgttctggct agtcagggac cgtagaccgt
651 atggtacacc catggacttt ggccaggtgt tcaacatgtt cgacaacgag
701 cccagtactg caaccgtgaa gaacgatctc cgcgatcgtt tccaggtcat
751 gcacaagttc tatgccaagg ttactggtgg tcagtatgcc agcaacgagc
801 aggctctggt caagagattc tggaaggtca acaatcatgt ggtctacaat
851 caccaagagg ccgggaagta cgagaatcat acggagaacg cactattact
901 gtatatggca tgtacccatg cctctaaccc cgtgtatgca acgctcaaga
951 ttcggatcta tttttatgat tcgatcacaa attaataaaa tttgaatttt
1001 attgaatgat tttccagtac atgattgaca tacgacttgt ctgttgcgaa
1051 acgaacagct ctaattacat tattaagcgc aattacacct aattgctcta
1101 agtacagcat gactaagtgc ttaaatctag ctaaataagt cttcccagaa
1151 gctgtcagag aagtcgtcca gacttggaag ttcaggaatg ccttgtggag
1201 acccaatgct ctcctgaggt tgtggttgaa ccttatctgg atgtggtaca
1251 ctcttgtccg agtgtacggt ggatcctcta ccctgtacat cttgaaatac
1301 aggggatttg ttatctccca gatatagacg ccattctcta cctgacgtgc
1351 agtgatgagt tcccctgtgc gtgaatccat ggcctgtgca gttgagatgc
1401 tggtaaatgg agcagccgca gtccagatca attcgtcgtc gtctgattgc
1451 tctcttcttc gcaatcctgt gtcgtggttt gatagagggg ggagttgagg
1501 aagatgaatt tagcattgtg tattgtccag gcttttagtg atgagttttc
1551 ctgcttgtcc aggaaatctt tatagctggc cccctctcca ggattgcaga
1601 gcacgattga tgggataccc cctttaattt gaacaggctt gccgtacttg
1651 caattggact gccaatcttt ttgagcacca atcaattcct tccagtgctt
1701 tagctttagg tattgcgggc tgacatcatc gatgacgtta tactcaactt
1751 gatttgagta gacccgggaa ttgaaatcta aatggccact caagtaatta
1801 tgtgggccta acgcacgagc ccacatcgtc ttaccagttc gagaatcacc
1851 ttctacaatc aaactgatgg gcctgatagg ccgcgcagcg gaacctctcc
1901 caaaataatc atccgcccat tcctgcatct cttccggaac gttagtgaac
1951 gatgagaggg gaaacggtgg agcccacggt tccggagcct ttgtaaagat
2001 cttttctagg ttggagcgga tgttatggtg ttggacgatg aatgactttg
2051 gatctccggc tctgataatt tcaagagcct ctgaaacacc tcctgcattg
2101 acggcgttgt ggaagacatc gtccttgttg gccttggtac ccccagacac
2151 tttgtattgt ccggattcac aatagtcacc atctttggtg atgtagttcc
2201 tgacggcaac ggtgtctttg gcagcttgca cgtttgggtg aaaactggct
2251 gaccgtctgg ggtgagtaaa gtcgaaaaat cttgcatcct tgatgttgga
2301 cttccctgat aattgtatga gacagtgtag atgggggttt ccatcggagt
2351 gttcctcacg tgcgactctg atataggtag gttggacgac tgcccatgga
2401 agggcttgaa gcatttgaag agcttcatct ttgggtatgt cgcatcgcgg
2451 atatgtgagg aatatgtttc tggcttgtaa tctaaaagaa tggggaagtc
2501 ggggcatatt tgtaaattta tgttcaggac tccagcccag gactccaggg
2551 gagctctcaa cttctgtcat atttgctgga gtcctggagt cccatttata
2601 ctacaactct ctaaggctct tagggggcac gtggcggcca tccgtataat
2651 att