Sequence of DPV Cotton leaf curl Multan alphasatellite

Ageratum enation virus associated DNA 1, complete sequence

ACC No: FN543100

Dated: 2009-11-18 | Length: 1374 | CRC: -2065279695

                
ID   FN543100; SV 1; circular; genomic DNA; STD; VRL; 1374 BP.
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AC   FN543100;
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DT   18-NOV-2009 (Rel. 102, Created)
DT   18-NOV-2009 (Rel. 102, Last updated, Version 1)
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DE   Ageratum enation virus associated DNA 1, complete sequence
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KW   complete genome.
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OS   Ageratum enation virus associated DNA 1
OC   Viruses; Satellites; unclassified Satellites;
OC   Begomovirus-associated alphasatellites.
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RN   [1]
RP   1-1374
RA   Kumar Y.;
RT   ;
RL   Submitted (14-AUG-2009) to the EMBL/GenBank/DDBJ databases.
RL   Kumar Y., Plant Virus Lab, Floriculture Division, Institute of Himalayan
RL   Bioresource Technology (CSIR), PO Box 6, Palampur, Himachal Pradesh 176061,
RL   INDIA.
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RN   [2]
RA   Kumar Y., Hallan V., Zaidi A.A.;
RT   "First report of Ageratum enation virus causing leaf curl disease of
RT   Zinnia";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1374
FT                   /organism="Ageratum enation virus associated DNA 1"
FT                   /host="Zinnia sp."
FT                   /mol_type="genomic DNA"
FT                   /country="India:Kangra, Himachal Pradesh"
FT                   /collected_by="Yogesh Kumar"
FT                   /identified_by="Yogesh Kumar"
FT                   /tissue_type="host leaf"
FT                   /db_xref="taxon:666636"
FT   CDS             77. .1024
FT                   /gene="rep"
FT                   /product="replication associated protein"
FT                   /protein_id="CBA18493.1"
FT                   /translation="MPTIQSQWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPTT
FT                   KRRHLQGYLQLKGKRSLAQVKALFGDLKPHLEKQRARKTDEARDYCMKEETRVSGPFEF
FT                   GDYCPAGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEDFQKTAKEIQISNLKSW
FT                   QSRLKTLLERDPDDRTIIWVYGPIGGEGKSTFARDLYRDGSWFYTRGGSADNVSYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDF
FT                   EKISNDRVHVIPCIPCGVCLKHHIHEIKCDEYLD"
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SQ   Sequence 1374 BP; 417 A; 250 C; 307 G; 400 T; 0 other;

fn543100 Length: 1374  18-NOV-2009  Type: N  Check: 455  ..

       1  acccagcctc ggttccctct ccttggttcc ctcgtgccta tcacgtgctc
      51  tctctcttct gtattcctaa tcgaagatgc ctactattca gtcacaatgg
     101  tggtgtttta ctgttttctt cctctctgcg accgcacctg acctggttcc
     151  tctcttcgag aacactcacg tgagttatgc ctgctggcaa gaagaggagt
     201  ctccgacgac gaaacgtcgc catttgcagg gttatctcca attgaagggg
     251  aaaagaagcc ttgctcaggt gaaagctctt ttcggtgacc tgaaacctca
     301  tttggagaaa caacgtgcgc gtaagaccga cgaagctcgg gattactgta
     351  tgaaagagga aactagggtt tccggcccct ttgaatttgg ggattattgt
     401  cctgctggtt ctcacaaacg ccggcaacga gaatctgtaa ttcgaagtcc
     451  ggtgagaatg gctgaggaaa atccgtccgt cttccgacga gttaaggcaa
     501  agattgcaga agaagatttc cagaagaccg ctaaggagat tcaaatttca
     551  aatttgaaat cttggcaatc gcgcttgaag acgctccttg aacgggaccc
     601  agatgaccgc actatcatct gggtatatgg acccattggt ggggaaggaa
     651  aatccacctt tgccagagac ctgtacagag atgggtcctg gttctataca
     701  cgtggtggct cagcagataa tgttagctac cagtatatag gatgtttagg
     751  aaataatatt gtatttgata tccctcgtga taagaaggat tatctacaat
     801  atagtttaat agagatgttt aaggatagat taatagttag taataagtac
     851  gagcctctta tggctccctt aattaattgt attcatgtag ttgtcatgtc
     901  taattttctc ccagactttg agaagattag taatgatagg gtccatgtaa
     951  ttccttgtat tccttgtggt gtttgtctta aacatcacat tcatgaaata
    1001  aaatgtgatg agtatttgga ttaattttgt ttctttaaaa aaagaaagaa
    1051  tgaaatgaaa aaaaaagaaa tattgaatca tattttatta ttcttgagaa
    1101  aatcaggccc cgcaggggca tctgttaaaa atattttgtt tctttaaaaa
    1151  aagaaagaat gaaatgaaaa aaaaaatgaa tattaaaaaa ataaaaatct
    1201  cagggtttat aatgtgggcc atactaagtg cgctagatga gagagaaaat
    1251  gcaattggtt actgtagcaa cacggaggga ctaaagttgt taattgttat
    1301  aagtatggga ctgttgtgta aatagccggg atcccaggat ataaataaca
    1351  cgtcaccgag gctggcatag tatt