Sequence of DPV Okra leaf curl Mali alphasatellite
Cotton leaf curl Gezira alphasatellite, complete sequence, isolate BF:Kampala:Okra7
ACC No: FN554580
Dated: 2010-04-07 | Length: 1387 | CRC: -1925875026
ID FN554580; SV 1; circular; genomic DNA; STD; VRL; 1387 BP.
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AC FN554580;
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DT 29-NOV-2009 (Rel. 103, Created)
DT 07-APR-2010 (Rel. 104, Last updated, Version 2)
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DE Cotton leaf curl Gezira alphasatellite, complete sequence, isolate
DE BF:Kampala:Okra7
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KW .
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OS Cotton leaf curl Gezira alphasatellite
OC Viruses; Satellites; unclassified Satellites;
OC Begomovirus-associated alphasatellites.
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RN [1]
RP 1-1387
RA Tiendrebeogo F.;
RT ;
RL Submitted (28-SEP-2009) to the EMBL/GenBank/DDBJ databases.
RL Tiendrebeogo F., CRSBAN/UFR/SVT Universite de Ouagadougou,
RL Biochimie-Microbiologie, 03 BP 7131 Ouagadougou 03, Ouagadougou, BURKINA
RL FASO.
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RN [2]
RA Tiendrebeogo F., Lefeuvre P., Hoareau M., Villemot J., Konate G.,
RA Traore A.S., Barro N., Traore V.S., Reynaud B., Traore O., Lett J.M.;
RT "Molecular diversity of cotton leaf curl Gezira virus isolates and their
RT satellite DNAs associated with okra leaf curl disease in Burkina Faso";
RL Virol. J. 7:48-48(2010).
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FH Key Location/Qualifiers
FH
FT source 1. .1387
FT /organism="Cotton leaf curl Gezira alphasatellite"
FT /host="Abelmoshus esculentus"
FT /isolate="BF:Kampala:Okra7"
FT /mol_type="genomic DNA"
FT /country="Burkina Faso:Kampala"
FT /collected_by="Edgar Traore"
FT /collection_date="Oct-2008"
FT /db_xref="taxon:679536"
FT CDS 65. .1012
FT /gene="Rep"
FT /product="replication associated protein"
FT /db_xref="GOA:D1GZI7"
FT /db_xref="InterPro:IPR000605"
FT /db_xref="InterPro:IPR003365"
FT /db_xref="UniProtKB/TrEMBL:D1GZI7"
FT /protein_id="CBG22795.1"
FT /translation="MPSVQSKWWCFTIFFLSSTAPDLVPFFENTAVSYACWQEEESPTT
FT KRRHLQGYLQCKGNRTLAQVKSLFGELNPHLEKQRARKTDEARDYCMKEETRVSGPFEF
FT GEYCPSGSHKRRQRDAVVRSPVRMAEENPSVYRRVKAKIAEEEFQKSAPEIQISNLKSW
FT QLRLKQLLARDADDRTIFWVYGPDGGEGKSTFARDLFRSGTWFYTRGGSADNVSYQYIG
FT CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLVVSNKYEPLMAPMISCIHVVVMSNFLPDM
FT EKISSDRVHVIPCRPCGVCLKHHGMEIKCDDYVD"
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SQ Sequence 1387 BP; 428 A; 263 C; 320 G; 376 T; 0 other;
fn554580 Length: 1387 07-APR-2010 Type: N Check: 2821 ..
1 acccggcctc gtatccccga cctagtatcc cttgtgcgat tcacgtgagt
51 tcatctctta aagtatgcct tctgtgcagt ctaagtggtg gtgtttcacc
101 attttctttc tgtcttccac tgcacccgac ctcgtcccct tctttgagaa
151 cactgctgtc agttacgcct gctggcaaga agaggagtct ccgactacga
201 agcgtcgtca cttacagggc tacctacagt gcaaggggaa ccgaaccctt
251 gcacaggtga agtccctgtt tggggaattg aacccccatc tggagaaaca
301 acgtgcccga aagaccgatg aagcccgcga ctattgcatg aaagaagaaa
351 ctagggtttc tgggcctttc gaatttggtg aatattgccc tagtgggtct
401 cataagagaa gacaacggga cgccgtcgtt agatccccgg tacgaatggc
451 ggaagagaac ccctctgttt accgtcgagt aaaggcaaag attgccgagg
501 aagaattcca gaagtccgcg cctgagattc aaatttcaaa tttgaaatct
551 tggcaattgc gcctcaagca gctgctcgcg cgggatgctg acgaccgcac
601 tatcttctgg gtgtatgggc ccgatggggg agaaggaaaa tcgacgttcg
651 cgcgcgatct tttcagaagt gggacctggt tctacactcg tggaggatct
701 gcagacaacg tcagctatca gtatatagga tgtttaggaa ataatattgt
751 attcgatatt cctcgtgata agaaggatta tctgcaatac agtttaatag
801 aaatgtttaa ggatagatta gtagttagta ataagtatga gcctcttatg
851 gcccctatga ttagttgtat tcatgtagtt gttatgtcta attttcttcc
901 tgacatggag aaaattagca gtgatagagt ccatgtaatc ccctgtagac
951 cttgtggtgt ttgtcttaaa caccatggta tggaaataaa atgcgatgat
1001 tatgtggatt aaataattgt ctcaacaact aataatgaca ataccattaa
1051 tttgaatttg aaataaatat gccgcgcagc ggcattaact tagaatattt
1101 ttgcttcttg aaaacaagaa ggaatgaaat gaaaaaaaaa ataaaaactg
1151 ttcaattatg cggaaggact aaaactgaaa atatgtccgt acgattaaaa
1201 acacggaggg actattttgt aatatataat ttaatgaata aaagaaattg
1251 aaaactaaaa tggaaaatgc atagaaggac taaaagtgta atatgcccaa
1301 tattagaaaa cactgtagaa acacggaggg actaaagttg taattaatag
1351 ggagtctagg ttataaatac gaggccggtg tagtatt