Sequence of DPV Cotton leaf curl Gezira alphasatellite
Cotton leaf curl Gezira alphasatellite, complete sequence, isolate BF:Po:Okra5
ACC No: FN554583
Dated: 2010-04-07 | Length: 1353 | CRC: -723213341
ID FN554583; SV 1; circular; genomic DNA; STD; VRL; 1353 BP.
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AC FN554583;
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DT 29-NOV-2009 (Rel. 103, Created)
DT 07-APR-2010 (Rel. 104, Last updated, Version 2)
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DE Cotton leaf curl Gezira alphasatellite, complete sequence, isolate
DE BF:Po:Okra5
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KW .
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OS Cotton leaf curl Gezira alphasatellite
OC Viruses; Satellites; unclassified Satellites;
OC Begomovirus-associated alphasatellites.
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RN [1]
RP 1-1353
RA Tiendrebeogo F.;
RT ;
RL Submitted (28-SEP-2009) to the EMBL/GenBank/DDBJ databases.
RL Tiendrebeogo F., CRSBAN/UFR/SVT Universite de Ouagadougou,
RL Biochimie-Microbiologie, 03 BP 7131 Ouagadougou 03, Ouagadougou, BURKINA
RL FASO.
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RN [2]
RA Tiendrebeogo F., Lefeuvre P., Hoareau M., Villemot J., Konate G.,
RA Traore A.S., Barro N., Traore V.S., Reynaud B., Traore O., Lett J.M.;
RT "Molecular diversity of cotton leaf curl Gezira virus isolates and their
RT satellite DNAs associated with okra leaf curl disease in Burkina Faso";
RL Virol. J. 7:48-48(2010).
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FH Key Location/Qualifiers
FH
FT source 1. .1353
FT /organism="Cotton leaf curl Gezira alphasatellite"
FT /host="Abelmoshus esculentus"
FT /isolate="BF:Po:Okra5"
FT /mol_type="genomic DNA"
FT /country="Burkina Faso:Po"
FT /collected_by="Edgar Traore"
FT /collection_date="Oct-2008"
FT /db_xref="taxon:679536"
FT CDS 81. .950
FT /gene="Rep"
FT /product="replication associated protein"
FT /db_xref="GOA:D1GZI8"
FT /db_xref="InterPro:IPR000605"
FT /db_xref="InterPro:IPR003365"
FT /db_xref="UniProtKB/TrEMBL:D1GZI8"
FT /protein_id="CBG22798.1"
FT /translation="MPSIKSVCWCFTLNFTGEIPQLDFSNKGVQYAVWQHEKVNHDHLQ
FT GFFQFKGRRSLLQAKKVFDGYHPHLEVMRAPSAEQAKKYCEKPESRVSGPWVFGEFVPS
FT GSNKRKLEELLENSDNEAEDPQRYRRAMAKKMNKDSHQWALDNAFPFELKEWQERLSEL
FT ISSPADDRTIIWVYGPTGGEGKSQFARYLGLNKSWIYLPGGKSNDMMYMYCKSPKCNLV
FT IDYPRCNKEYINYSFLEMIKNRTIYSYKYEPVGFIDPTCNVHVIVMANFLPDYERISED
FT RIKLIDLS"
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SQ Sequence 1353 BP; 400 A; 233 C; 283 G; 437 T; 0 other;
fn554583 Length: 1353 07-APR-2010 Type: N Check: 3875 ..
1 acccggcctc agtcctctgt cccctgtacg gaaattgata aaatttcctc
51 ctggtaccct tcagctctct ctcttctgtc atgccttcta ttaagagtgt
101 ttgttggtgt tttactctta atttcactgg ggaaattcct cagttggatt
151 tttcgaataa gggtgtccag tatgctgtct ggcaacatga gaaggtgaat
201 catgatcacc ttcaagggtt tttccagttc aagggtcgac gttcgttgtt
251 gcaggcaaag aaagtatttg atggttacca tcctcatctg gaagtgatgc
301 gagctccttc tgcagaacag gcgaagaagt attgtgagaa acctgaatct
351 agggtttctg gtccatgggt atttggtgaa tttgtccctt ctggttctaa
401 taagcgaaaa ctggaagaat tgctcgagaa ttcggacaat gaagctgaag
451 acccccagag atatcgtcgt gcaatggcga agaagatgaa taaagattca
501 catcaatggg cgttggataa tgcttttcca tttgaattaa aggaatggca
551 ggagcgtctg tctgaattga tatcctcgcc tgcagatgat cgtactatca
601 tctgggtata tggacccact ggtggggaag gaaaatcgca atttgcgcgc
651 tatctgggtt tgaataaaag ttggatttat ctacctgggg ggaaatccaa
701 tgatatgatg tatatgtatt gtaaatcccc taagtgtaat ttagtaatag
751 attatcctag gtgtaataaa gagtatatta attatagttt tttagaaatg
801 attaagaata gaactatcta ttcttataag tatgaacctg ttggatttat
851 tgatccaaca tgtaatgtac atgtaattgt aatggctaat ttcctccctg
901 attatgagag gattagtgaa gatagaataa aattaattga tttgtcttaa
951 tttcccttct gttttaattg ttcgttataa ttaattacca cacaaacata
1001 aactaagaaa accaaagccg cgcagcggcc aagagataaa aatatttttg
1051 cttcttgaaa acaagaagga atgaaatgaa ataataattt aaaaataatt
1101 aatttttgta ttatataaat aaacaacagt aattgggctt ttatgtgtta
1151 ggcccaagtt atccgggttt tttaaatgga tcattttacc cgaataggat
1201 ccgcgtgttt ctacagtgtt tcattaaggg tattttcgtc caaataattt
1251 cagcctttgt cccctgcgca tgttagcaat aaagctcagt cccctgcgca
1301 cgataacctg tgtcccctat ataaggaatt acactgaggc cggtaccagt
1351 att