Sequence of DPV Tobacco bushy top virus
Tobacco bushy top virus complete sequence, isolate YYXi, genomic RNA
ACC No: FN597051
Dated: 2011-11-20 | Length: 4152 | CRC: -1139369008
ID FN597051; SV 1; linear; genomic RNA; STD; VRL; 4152 BP.
XX
AC FN597051;
XX
DT 20-NOV-2011 (Rel. 110, Created)
DT 20-NOV-2011 (Rel. 110, Last updated, Version 1)
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DE Tobacco bushy top virus complete sequence, isolate YYXi, genomic RNA
XX
KW .
XX
OS Tobacco bushy top virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Umbravirus.
XX
RN [1]
RP 1-4152
RA Li F.;
RT ;
RL Submitted (20-NOV-2009) to the INSDC.
RL Li F., Phytopathology, Yunnan Agricultural University, Key Laboratory for
RL Plant Pathology of Yunnan Province, 650201, CHINA.
XX
RN [2]
RA Li F., Yin C.X., Qin X.Y., Chen H.R.;
RT "Complete nucleotide sequence and genome organization of YYXi isolate of
RT Tobacco bushy top virus";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .4152
FT /organism="Tobacco bushy top virus"
FT /isolate="YYXi"
FT /mol_type="genomic RNA"
FT /country="China"
FT /db_xref="taxon:184020"
FT 5'UTR 1. .10
FT CDS 11. .958
FT /product="hypothetical protein"
FT /note="ORF1"
FT /protein_id="CBH71320.1"
FT /translation="MEFINKIKQLLAMNFKPSKGVMSREELREAFDPTWELLITQARVT
FT TEVSRQCEDWYTLAVPTTYRLPELAVEEAVREKSIAREVAAKCPPEDPVPESLQGPQPV
FT PLDKSPERSSQDAEREALDEIWGLPTPEPHPLPRYFERRYQALARTCQKDYTNWQIIPY
FT TGGPRVLGEEDVLPMATGVIPLPPPPPKASVVGAILGLSTRFTKVAGEVKGRLSAPPRE
FT PSPTCIGLEQVAGEPMGYMNAHSVAMELRARYGVQPATAANLQLGNRVAREILEKQCGA
FT TRDMVFILGHLATTLWFTPTMVDLALQCGPKDFC"
FT CDS 934. .2607
FT /product="hypothetical protein"
FT /note="ORF2"
FT /protein_id="CBH71321.1"
FT /translation="MWAQGFLLGDVVARRGVETKVKTKIHPKIRVLRAARPRPVERVSY
FT QIDVVRPCADFGVHNNSLNNLVRGVNERVFYTDHKRKEPRRPSAGSFDKIDISEIKAFR
FT VQPWTLGEVVDSYTGSQRVRYGQAVESLAVTPLSRNDARVKTFVKAEKINFTAKPDPAP
FT RVIQPRDPRFNACFAKYTKPLEPLLYKQLGKLYQFPCIAKGFNAVETGEIVAKKWKCFS
FT DPVCVGLDASRFDQHVSCDALRFTHSVYKRFVKGREVNKLLSWMYKNHALGSAKDGFVK
FT YEVEGCRMSGDMDTALGNCVLMVLMTRQLCKNLSIPHELMNNGDDCIVIFDRQYLSTFQ
FT DAVEPWFKELGFTMKVEEPVYHLERVDFCQTRPVYDGKKWRMVRHISSIAKDCCSVIDW
FT EQLPAWWNAIGECGIAVAGGIPIHNSFLRWLLRSGESNPDLLKHGAWKNEGLAWYRMGM
FT DLSHERHVSDEARASFHTAFGIEPSMQVALEQIYDSLPAPTIGGKRARVCKPGEMVLVD
FT SLPPRHFNDYFQDVGIGGSSSDYVVPGTHEFEPGTLWTQC"
FT CDS 2757. .3470
FT /product="hypothetical protein"
FT /note="ORF3"
FT /protein_id="CBH71322.1"
FT /translation="MSTIINVNTHPQGRYERGAAQRSIRGSDVKGARGIKPRRSNPPPG
FT RKQGGNDPTAATQKSRKNRQRPETVPPHETHGGTFIHREDCGGVHAPHTGRCWRGGRNL
FT GPRQHATTPKQRWAPRKISDERRAQVDSILSPLLDTLKLSSEGGAPELLHCIGVLRGEL
FT RRRREPVQSAHNVGAEGRVRSTQLLDEAPKVSTDLPAPGEGQSVLPNPNSGGTEKCDVE
FT SVCNNCDRAPTTNKW"
FT CDS 2773. .3507
FT /product="hypothetical protein"
FT /note="ORF4"
FT /protein_id="CBH71323.1"
FT /translation="MSTLIHKADTKEELLNALYGEVTLRELEESNLGVLTPHRAENKVV
FT MTPLLPPRSQGRIASVLKRFRPTKHTGGLLFIEKIVVVFTPHIPDDAGGEVEIWVHDNM
FT LPHLNSVGPRVRFPMSGGPRLIAFYPPYSIPLSCQVRGAPRSYFIVSEYSGVNFVAGAS
FT PFSLHIMWEPKVECVAHNYLMRPPKSVPICRHLVKDSLSSLTLTQGALRSAMSNRYATT
FT ATGLPPLTSGEQDKEVVSQPPG"
FT 3'UTR 3508. .4152
XX
SQ Sequence 4152 BP; 988 A; 1071 C; 1217 G; 876 T; 0 other;
fn597051 Length: 4152 20-NOV-2011 Type: N Check: 7364 ..
1 aggttacgat atggagttca tcaacaagat aaagcaattg ttggcaatga
51 atttcaagcc ctcaaagggc gtaatgtctc gggaggagct ccgtgaagct
101 ttcgatccca cttgggagct cctcatcaca caggctcgtg tcaccactga
151 ggtgtcacgc cagtgtgagg attggtacac tctagctgta cccaccacct
201 accgcttgcc agagttggcg gtagaagagg ctgtgcgcga gaagagtata
251 gcgcgagagg tggcggccaa gtgcccccct gaggacccgg ttcctgaatc
301 cctgcagggg ccacagcctg ttcccttgga taagagcccc gagcgctcta
351 gccaggatgc cgagcgtgag gcgctcgatg agatatgggg gctccctact
401 cctgagccac accccttgcc caggtatttt gagcggcgtt accaggcgct
451 ggcccggacc tgccagaagg actacaccaa ttggcagatc ataccttaca
501 cgggtgggcc tcgcgtgttg ggggaggaag acgtgctgcc aatggctacg
551 ggggttatac ccttgccccc gcccccccct aaggcttccg tggttggggc
601 tatattgggg ctgtctaccc gcttcaccaa ggtggcgggg gaagtgaagg
651 gcaggctgag cgcaccgccg cgggagccct cgcccacttg cattggctta
701 gagcaggtgg ctggtgagcc catgggctac atgaatgcac actctgtagc
751 catggagttg cgggctaggt acggagtcca gcccgccaca gctgcgaact
801 tgcagcttgg aaaccgggtg gccagggaaa tcctggaaaa acagtgcggg
851 gccacccgcg acatggtgtt catactcggg cacctcgcca ccaccttgtg
901 gttcaccccc actatggtgg acttggccct tcaatgtggg cccaaggatt
951 tttgctaggg gatgtggtcg ctcggagggg tgtagagaca aaagtgaaga
1001 cgaaaatcca ccccaaaatc cgagtgctta gggcggctcg tccccggccc
1051 gtggaaagag tgtcgtacca aatcgacgtg gtgcggccct gtgctgactt
1101 tggagtccac aacaactccc tcaacaattt agtgcgaggg gttaatgagc
1151 gggtgttcta cacagaccac aaaaggaaag agcctcgcag accttcagct
1201 ggtagtttcg acaagatcga tatcagcgag ataaaagcgt tcagagtcca
1251 gccgtggacc ctcggggagg tcgttgatag ctacacgggt agccagagag
1301 tgcggtatgg acaagctgtt gaatccttag cagtaacgcc cctctcacga
1351 aacgacgccc gggtcaaaac atttgtaaag gcggaaaaga taaacttcac
1401 cgccaagccc gacccggctc ctcgcgttat ccagccgcgg gatccaaggt
1451 tcaatgcctg ctttgccaaa tacacaaagc ccttggaacc cctcctatac
1501 aagcagctgg gtaagcttta ccagttccca tgcatcgcaa aaggctttaa
1551 cgccgtagag accggagaga tagtagccaa gaagtggaag tgcttcagtg
1601 accctgtctg tgtgggttta gatgcctccc ggtttgacca gcatgtgtca
1651 tgcgatgcac tacggttcac ccatagcgtg tacaaacggt tcgtgaaggg
1701 cagggaagtg aacaagttgc tttcctggat gtacaaaaac cacgctttgg
1751 gaagtgcgaa ggacggattc gtcaagtacg aggtggaagg ttgtcggatg
1801 agtggggata tggatacagc cttagggaat tgtgtcctga tggtcctcat
1851 gactaggcag ctatgcaaga acctctccat accgcacgaa ctgatgaaca
1901 acggcgacga ctgcatagtt atattcgaca ggcagtacct gtcaactttt
1951 caggatgcag ttgagccttg gtttaaggaa ctagggttta caatgaaggt
2001 cgaggagcca gtctaccatc tcgaacgagt agacttttgc cagacccgtc
2051 ccgtgtatga cggcaagaag tggagaatgg tcaggcatat ctcaagtata
2101 gcgaaggatt gctgttcagt cattgactgg gaacagttac cggcttggtg
2151 gaacgccatt ggagaatgtg gcattgccgt ggctggtggt atacccatac
2201 acaacagctt cttgagatgg ctcctgagat caggtgagag caaccctgat
2251 ctcctgaagc atggcgcatg gaaaaatgag ggcctagcgt ggtaccggat
2301 gggcatggac ctatcccatg agagacacgt tagtgatgaa gcgcgcgcca
2351 gcttccacac tgcctttgga atcgaaccat ccatgcaggt cgcattagag
2401 cagatctatg actcattgcc tgctcccacc attggtggga aacgagccag
2451 agtgtgtaaa cctggtgaaa tggtattggt tgattcactc ccgccgcggc
2501 actttaatga ttacttccag gatgtcggaa taggggggag tagtagtgat
2551 tacgttgtcc cggggaccca cgagtttgaa ccggggacgt tgtggactca
2601 atgttagtcg attaagttag ccaggcatat ggttgcaagc gctggggact
2651 tagtccatag agccactggt aaagagcctc cagtgggcag gcccgccttg
2701 atgagtatta gcgagtggac acccgggtag ccgcggacaa tgcccgacgg
2751 gtttcaatgt ctacgatcat aaatgtcaac actcatccac aaggcagata
2801 cgaaagagga gctgctcaac gctctatacg gggaagtgac gttaagggag
2851 ctcgaggaat caaacctcgg cgttctaacc ccccaccggg ccgaaaacaa
2901 ggtggtaatg accccactgc tgccacccag aagtcaagga agaatcgcca
2951 gcgtcctgaa acggttccgc cccacgaaac acacgggggg acttttattc
3001 atagagaaga ttgtggtggt gttcacgccc cacataccgg acgatgctgg
3051 cggggaggta gaaatctggg tccacgacaa catgctacca cacctaaaca
3101 gcgttgggcc ccgcgtaaga tttccgatga gcggagggcc caggttgata
3151 gcattttatc ccccctactc gataccctta agttgtcaag tgaggggggc
3201 gccccggagc tacttcattg tatcggagta ctccggggtg aacttcgtcg
3251 caggcgcgag cccgttcagt ctgcacataa tgtgggagcc gaaggtagag
3301 tgcgtagcac acaactactt gatgaggccc ccaaagtcag taccgatctg
3351 ccggcacctg gtgaaggaca gtctgtcctc cctaacccta actcaggggg
3401 cactgagaag tgcgatgtcg aatcggtatg caacaactgc gaccgggctc
3451 ccaccactaa caagtggtga gcaagataag gaggtagtgt cccaacctcc
3501 aggctgaaat ggacacaaaa cggagctaga tttagtgttg caattgctag
3551 accgttagcc actacgctag acagtgcgat aactgaggtc gtctatgacc
3601 cacagggtgc catcctgtgc aatttctaac ccttggcagg ggtgatccta
3651 gaggacgcgg gcattgactt gcctggggat gcttctagtt acataccgga
3701 gtggttgata gacctctgtg taaggaaaca ggtgtgagac tggatcctgg
3751 gaaacaggct gggatggtcc cgtaagttcg ggcggtgccc ttcgggggta
3801 accccaccgc cgacgtatca cctcacacgc tgttgaccga taagccgagg
3851 ttttggaacc gcaccactct ggaggttccc tctccttatg aggtggaggc
3901 acagcacgcc ttaagtgtct gcgatccggt gttcacgtgc cggtggtccc
3951 cctagttaac gtggtgccac agtctgtggt aggggcagct ggtcggattc
4001 cagcaaaaac caagtagcaa gtggacgttg ctacctcgag cctagagtca
4051 tgggcccgca tcgacgtttg cggtaactca cagcgggcga taatagctgt
4101 tgagaatgtc ggttcctgac ttagcgggag atgagcactt tctctcgcgc
4151 cc