Sequence of DPV Cotton leaf curl Gezira alphasatellite
Okra yellow crinkle Cameroon alphasatellite [CM:Lys1sp3:09] complete sequence, isolate Lys1sp3
ACC No: FN675285
Dated: 2011-01-10 | Length: 1356 | CRC: 1101089148
ID FN675285; SV 1; linear; genomic DNA; STD; VRL; 1356 BP.
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AC FN675285;
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DT 10-JAN-2011 (Rel. 107, Created)
DT 10-JAN-2011 (Rel. 107, Last updated, Version 1)
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DE Okra yellow crinkle Cameroon alphasatellite [CM:Lys1sp3:09] complete
DE sequence, isolate Lys1sp3
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KW .
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OS Okra yellow crinkle Cameroon alphasatellite [CM:Lys1sp3:09]
OC Viruses; Satellites; Satellite Nucleic Acids;
OC Single stranded DNA satellites; Begomovirus-associated alphasatellites.
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RN [1]
RP 1-1356
RA Nkeabeng Leke W.W.;
RT ;
RL Submitted (26-FEB-2010) to the EMBL/GenBank/DDBJ databases.
RL Nkeabeng Leke W.W., Department of Plant Bilogy and Forest Genetics, SLU,
RL Box 7080, SE-750 07, SWEDEN.
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RN [2]
RA Leke W.N., Kvarnheden A., Brown J.K.;
RT "Diversity and novel DNA satellites associated with monopartite
RT begomoviruses in the equatorial rain forest region of Cameroon";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .1356
FT /organism="Okra yellow crinkle Cameroon alphasatellite
FT [CM:Lys1sp3:09]"
FT /isolate="Lys1sp3"
FT /mol_type="genomic DNA"
FT /country="Cameroon:Lysoka"
FT /isolation_source="Abelmoschus esculentus"
FT /collected_by="W.N.Leke"
FT /collection_date="2008"
FT /identified_by="W.N.Leke"
FT /db_xref="taxon:743027"
FT CDS 83. .952
FT /gene="rep"
FT /product="replication association protein"
FT /protein_id="CBK25782.1"
FT /translation="MPSIKSVCWCFTLNFTGEIPQLDFSNKGVQYAVWQHEKVNHDHLQ
FT GFFQFKGRRSLLQAKKVFDGYHPHLEVMRAPSAEQAKKYCEKPESRVSGPWVFGEFVPS
FT GSNKRKLEELLENSDNEAEDPQRYRRAMAKKMNKDSHQWALDNAFPFELKEWQERLSEL
FT ISSPADDRTIIWVYGPTGGEGKSQFARYLGLNKSWIYLPGGKSNDMMYMYCKSPKCNLV
FT IDYPRCNKEYINYSFLEMIKNRTIYSYKYEPVGFIDPTCNVHVIVMANFLPDYERISED
FT RIKLIDLS"
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SQ Sequence 1356 BP; 391 A; 238 C; 283 G; 444 T; 0 other;
fn675285 Length: 1356 10-JAN-2011 Type: N Check: 8118 ..
1 acccggcctc agtcctctgt cccctgtacg gaaattgata aaatttcctc
51 ctggtaccct tcagctccct ctctcttctg tcatgccttc tattaagagt
101 gtttgttggt gttttactct taatttcact ggggaaattc ctcagttgga
151 tttttctaat aagggtgtcc agtatgctgt ctggcaacat gagaaggtga
201 atcatgatca ccttcaaggg tttttccagt tcaagggtcg acgttcgttg
251 ttgcaggcga agaaagtatt tgatggttac catcctcatc tggaagtgat
301 gcgagctcct tctgcagaac aggcgaagaa gtattgtgag aaacctgaat
351 ctagggtttc tggtccatgg gtatttggtg aatttgtccc ttctggttct
401 aataagcgaa aattggaaga attgctcgag aattcggaca atgaagctga
451 agacccccag agatatcgtc gtgcaatggc gaagaagatg aataaagatt
501 cacatcaatg ggcgttggat aatgcttttc catttgaatt aaaggaatgg
551 caagagcgtc tatcggaatt gatatcctct cctgcagatg atcgtactat
601 catctgggta tatggaccca ctggtgggga aggaaaatcg caatttgcgc
651 gctatctcgg tttgaataaa agttggattt atctacctgg ggggaaatcc
701 aatgatatga tgtatatgta ctgtaaatcc cctaagtgta atttagtcat
751 agattatcct aggtgtaata aagagtatat taattatagt tttttagaaa
801 tgattaagaa tagaactatc tattcttata agtatgaacc tgttggattt
851 attgatccaa catgtaatgt acatgtaatt gtaatggcta atttcctccc
901 tgattatgag aggattagtg aagatagaat aaaattaatc gatttgtctt
951 aatttccctt ctgttttatg tgttcgtttt aattaattac cacacaaaca
1001 taaactaaga aaacaaatgc cgcgcagcgg ccaagagata aaaatatttt
1051 tgcttcttga aaacaagaag gaatgaaatg aaataataat ttaaaattaa
1101 tcatttcttt tattatgtaa acagtcttct atgttattgg gcttctatgt
1151 tttgggccta atgtttccgg gttttccaaa tggatcattt tacccgaata
1201 ggatccgcgt gttgtaacag tgtttcatta agggtatttt cgtccaaata
1251 atttgagcta tgtcccctgc gcatgttagc aataaagctc agtcccctgc
1301 gcacgataac ctgtgtcccc tataaaagga attacactga ggccggtatc
1351 tatatt