Sequence of DPV Okra leaf curl Mali alphasatellite
Okra leaf curl Mali alphasatellite-Cameroon [CM:Lys1d3:09] complete sequence, isolate Lys1d3
ACC No: FN675290
Dated: 2011-01-10 | Length: 1389 | CRC: 1994753764
ID FN675290; SV 1; linear; genomic DNA; STD; VRL; 1389 BP.
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AC FN675290;
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DT 10-JAN-2011 (Rel. 107, Created)
DT 10-JAN-2011 (Rel. 107, Last updated, Version 1)
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DE Okra leaf curl Mali alphasatellite-Cameroon [CM:Lys1d3:09] complete
DE sequence, isolate Lys1d3
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KW .
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OS Okra leaf curl Mali alphasatellite-Cameroon [CM:Lys1d3:09]
OC Viruses; Satellites; Satellite Nucleic Acids;
OC Single stranded DNA satellites; Begomovirus-associated alphasatellites.
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RN [1]
RP 1-1389
RA Nkeabeng Leke W.W.;
RT ;
RL Submitted (26-FEB-2010) to the EMBL/GenBank/DDBJ databases.
RL Nkeabeng Leke W.W., Department of Plant Bilogy and Forest Genetics, SLU,
RL Box 7080, SE-750 07, SWEDEN.
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RN [2]
RA Leke W.N., Kvarnheden A., Brown J.K.;
RT "Diversity and novel DNA satellites associated with monopartite
RT begomoviruses in the equatorial rain forest region of Cameroon";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .1389
FT /organism="Okra leaf curl Mali alphasatellite-Cameroon
FT [CM:Lys1d3:09]"
FT /isolate="Lys1d3"
FT /mol_type="genomic DNA"
FT /country="Cameroon:Njombe"
FT /isolation_source="Abelmoschus esculentus"
FT /collected_by="W.N.Leke"
FT /collection_date="2008"
FT /identified_by="W.N.Leke"
FT /db_xref="taxon:743033"
FT CDS 64. .1017
FT /gene="rep"
FT /product="replication association protein"
FT /protein_id="CBK25787.1"
FT /translation="MPSVQSKWWCFTIFFLSSTAPDLVPFFENTAVSYACWQEEESPTT
FT KRRHLQGYLQCKGNRTLAQVKSLFGELNPHLEKQRARKTDEARDYCMKEETRVSGPFEF
FT GEYCPSGSHKRRQRDAVVRSPVRMAEENPSVYRRVKAKIAEEEFQKSAPEIQISNLKSW
FT QLRLKQLLARDADDRTIFWVYGPDGGEGKSTFARDLFRSGTWFYTRGGSAAADNVAYQY
FT IGCLGNNIVFDIPRDKRDYLQYSLIEMFKDRLVVSNKYEPLMAPMISCIHVVVMSNFLP
FT DMEKISSDRVHVIPCRPCGVCLKHHGMEIKCDDYVD"
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SQ Sequence 1389 BP; 422 A; 262 C; 325 G; 380 T; 0 other;
fn675290 Length: 1389 10-JAN-2011 Type: N Check: 6296 ..
1 acccggccct cgttatcccg acctagtatc ccttgtgcga ttcacgtgag
51 ttcatctctt aaaatgcctt ctgtgcagtc taagtggtgg tgtttcacca
101 ttttctttct gtcttccact gcacccgacc tcgtcccctt ctttgagaac
151 actgctgtca gttacgcctg ctggcaagaa gaggagtctc cgactacgaa
201 gcgtcgtcac ttacagggct acctacagtg caaggggaac cgaacccttg
251 cacaggtgaa gtccctgttt ggggaattga acccccatct ggagaaacaa
301 cgtgcccgaa agaccgatga agcccgcgac tattgcatga aagaagaaac
351 tagggtttct gggcctttcg aatttggtga atattgccct agtgggtctc
401 ataagagaag acaacgggac gccgtcgtga gatccccggt acgaatggcg
451 gaagagaacc cctctgttta ccggcgagta aaggcaaaga ttgccgagga
501 agaattccag aagtccgcgc ctgagattca aatttcaaat ttgaaatctt
551 ggcaattgcg cctcaagcag ctgctcgcgc gggatgctga cgaccgcact
601 atcttctggg tgtatgggcc cgatggggga gaaggaaaat cgacgttcgc
651 gcgcgatctt ttcagaagtg ggacctggtt ctatacacgt ggaggatctg
701 cagctgcaga taatgtagct taccagtaca taggatgttt aggaaataat
751 attgtattcg atattcctcg tgataagagg gattatctgc aatacagttt
801 aatagaaatg tttaaggata gattagtagt tagtaataag tatgagcctc
851 ttatggcccc tatgattagt tgtattcatg tagttgttat gtctaatttt
901 ctccctgaca tggagaagat tagcagtgat agagtccatg taatcccctg
951 tagaccgtgt ggtgtttgtc ttaaacacca tggtatggaa ataaaatgcg
1001 atgattatgt ggattaaata attgtctcaa caactaataa tgacaatatc
1051 attaacttga atttgaaata aatatgccgc gcagcggcat tatacttaga
1101 atatttttgc ttcttgaaaa caagaaggaa tgaaatgaaa aaataaaaag
1151 tgttcaatta tgcggaagga ctaaaactga taatatttcc gtacgattaa
1201 aaacacggag ggactatttt gtaatattta atttaatgta taaaagaaat
1251 tgaaaattaa aatggaaaat gcatagaagg actaaaaatg taatatgccc
1301 aatattagaa aacactgtag aaacacggag ggactaaagt tgtaattaat
1351 agggagtcta ggttataaat acgaggccgg tgtagtatt