Sequence of DPV Hibiscus leaf curl alphasatellite
Tobacco curly shoot virus associated DNA 1 rep gene for replication-associated protein, isolate Y278
ACC No: FN678900
Dated: 2010-08-14 | Length: 1374 | CRC: -1113920900
ID FN678900; SV 1; circular; genomic DNA; STD; VRL; 1374 BP.
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AC FN678900;
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DT 11-MAR-2010 (Rel. 104, Created)
DT 14-AUG-2010 (Rel. 105, Last updated, Version 2)
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DE Tobacco curly shoot virus associated DNA 1 rep gene for
DE replication-associated protein, isolate Y278
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KW .
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OS Tobacco curly shoot virus associated DNA 1
OC Viruses; Satellites; unclassified Satellites;
OC Begomovirus-associated alphasatellites.
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RN [1]
RP 1-1374
RA Zhou X.;
RT ;
RL Submitted (08-MAR-2010) to the EMBL/GenBank/DDBJ databases.
RL Zhou X., Zhejiang University, Institute of Biotechnology, No.268 Kuaixuan
RL Road, Hangzhou, Zhejiang 310029, CHINA.
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RN [2]
RA Xie Y., Wu P., Liu P., Gong H., Zhou X.;
RT "Characterization of alphasatellites associated with monopartite
RT begomovirus/betasatellite complexes in Yunnan, China";
RL Virol. J. 7(1):178-178(2010).
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FH Key Location/Qualifiers
FH
FT source 1. .1374
FT /organism="Tobacco curly shoot virus associated DNA 1"
FT /isolate="Y278"
FT /mol_type="genomic DNA"
FT /country="China:Yunnan"
FT /db_xref="taxon:240556"
FT CDS 78. .1025
FT /gene="rep"
FT /product="Rep protein"
FT /db_xref="GOA:Q7T7M5"
FT /db_xref="InterPro:IPR000605"
FT /db_xref="InterPro:IPR003365"
FT /db_xref="UniProtKB/TrEMBL:Q7T7M5"
FT /protein_id="CBK44086.1"
FT /translation="MAALKAQWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPTT
FT RRRHLQGYLQLKGQRTLNQVKAIFGDLKPHLEKQRARKTDEACDYCMKEETRVSGPFEF
FT GEYCPAGSHRRRQRELVIRSPVRMAEENPSVFRRVKAKIAEEEFQNSAHEIQISNLKSW
FT QLRLKTLLDRDPDDRTIIWVYGPTGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIG
FT CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDF
FT EKISSDRVHVIPCIPCGVCLKHHIHEIKCDEYLD"
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SQ Sequence 1374 BP; 409 A; 252 C; 315 G; 398 T; 0 other;
fn678900 Length: 1374 14-AUG-2010 Type: N Check: 1999 ..
1 accccgcctc gagaccccga gtttgagacc tgtccgtaca attgttcctc
51 ttctttaatt cttctgtctg agtaaacatg gcagccctca aagctcaatg
101 gtggtgtttc actgtctttt tcttgtccgc tacggctcct gatttggtgc
151 ccctgttcga gaacactcac gttagttacg cctgctggca agaggaagag
201 tctcccacga ctcgacgtcg ccacctgcag gggtatctcc aattgaaggg
251 tcagaggacc ttaaaccagg tgaaggctat atttggggat ttgaagcctc
301 atcttgagaa acagcgagct cgtaagacag acgaagcttg cgactattgt
351 atgaaagagg aaactagggt ttccggtcct tttgaatttg gggaatactg
401 tcctgctggt tctcacagac gccgacaaag ggaacttgta attcgatctc
451 cggtgagaat ggcagaggaa aatccgtccg tattccgacg agtcaaggca
501 aagattgctg aggaagaatt ccagaatagc gctcatgaga ttcaaatttc
551 aaatttgaaa tcttggcaac tgcgcctaaa gacgctcctc gacagggacc
601 cagatgaccg cactatcatc tgggtatatg gacccactgg tggggaagga
651 aaatccacct ttgccaggga cttgtacaga agtgggtcct ggttctatac
701 acgtggagga tctgcagaca acgtcagcta tcagtatata ggatgtttag
751 gcaataatat tgtatttgat atccctcgtg ataagaagga ttatctacag
801 tatagcctaa tagagatgtt taaggatagg ttaatagtta gtaataagta
851 cgagcctctt atggccccct taattaattg tattcatgtt gtagttatgt
901 ctaattttct ccctgatttt gagaagatta gcagtgatag ggtacatgta
951 attccttgta ttccttgtgg tgtttgtctt aaacatcaca ttcatgaaat
1001 taaatgtgat gagtatttgg attaattttg tttctttaaa aaaagaaaga
1051 atgaaatgaa aaaaaataaa catacaagcc caataatatg atttaattga
1101 gaaaacctgg ccccgcaggg gcatctgtta taaatatttt tgtttcttta
1151 aaaaaagaaa gaatgaaatg aaaaaaaaat aatataaaaa attataatat
1201 tcagggtttt aatgtgggcc atactaagtg cgctagatga gagagaaaat
1251 gcaattgggc actgttcata cacggaggga cttaagttgt aattgttgaa
1301 agtttgggac tgttatgtaa atatccttgg gtcccttggc tataaataac
1351 acgtcacgag gcgggtgtag tatt