Sequence of DPV Hibiscus leaf curl alphasatellite
Tobacco curly shoot virus associated DNA 1 rep gene for replication-associated protein, isolate Y249
ACC No: FN678902
Dated: 2010-08-14 | Length: 1374 | CRC: -2022644234
ID FN678902; SV 1; circular; genomic DNA; STD; VRL; 1374 BP.
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AC FN678902;
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DT 11-MAR-2010 (Rel. 104, Created)
DT 14-AUG-2010 (Rel. 105, Last updated, Version 2)
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DE Tobacco curly shoot virus associated DNA 1 rep gene for
DE replication-associated protein, isolate Y249
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KW .
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OS Tobacco curly shoot virus associated DNA 1
OC Viruses; Satellites; unclassified Satellites;
OC Begomovirus-associated alphasatellites.
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RN [1]
RP 1-1374
RA Zhou X.;
RT ;
RL Submitted (08-MAR-2010) to the EMBL/GenBank/DDBJ databases.
RL Zhou X., Zhejiang University, Institute of Biotechnology, No.268 Kuaixuan
RL Road, Hangzhou, Zhejiang 310029, CHINA.
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RN [2]
RA Xie Y., Wu P., Liu P., Gong H., Zhou X.;
RT "Characterization of alphasatellites associated with monopartite
RT begomovirus/betasatellite complexes in Yunnan, China";
RL Virol. J. 7(1):178-178(2010).
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FH Key Location/Qualifiers
FH
FT source 1. .1374
FT /organism="Tobacco curly shoot virus associated DNA 1"
FT /isolate="Y249"
FT /mol_type="genomic DNA"
FT /country="China:Yunnan"
FT /db_xref="taxon:240556"
FT CDS 78. .1025
FT /gene="rep"
FT /product="Rep protein"
FT /db_xref="GOA:D3VPJ2"
FT /db_xref="UniProtKB/TrEMBL:D3VPJ2"
FT /protein_id="CBK44088.1"
FT /translation="MAALKAQWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPTT
FT RRRHLQGYLQLKGQRTLNQVKAIFGDLKPHLEKQRARKTDEACDYCMKEETRVSGPFEF
FT GEYCPAGSHKRRQRELVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSAHEIQISDLKSW
FT QLRLKTLLDRDPDDRTIIWVYGPTGGEGKSTFARDLYKSGSWFYTRGGSADNVSYQYIG
FT QLGNNIVFDIPRDKKDYLQYNLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDF
FT EKISSDRVHVIPCIPCGVCLKHHIDEIRCSEYFD"
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SQ Sequence 1374 BP; 409 A; 241 C; 313 G; 411 T; 0 other;
fn678902 Length: 1374 14-AUG-2010 Type: N Check: 8949 ..
1 accccgcctc gagaccccga gttagagacc tgtccgtaca tttgtttctc
51 ttctttaatc cttctgtctg agtaaaaatg gccgccctca aagctcaatg
101 gtggtgtttc actgtcttct ttttgtccgc tacggctcct gatttggtgc
151 ccctgttcga gaacacgcac gttagttacg cctgctggca agaggaagag
201 tctcccacga ctcgacgtcg ccacctgcag gggtatctcc aattgaaggg
251 tcagaggacc ttgaaccagg tgaaggctat atttggggat ttgaagcctc
301 atcttgagaa acagcgagct cgtaagacag acgaagcttg cgactattgt
351 atgaaagagg aaactagggt ttccggtcct tttgaatttg gggaatactg
401 tcctgctggt tctcataaac gccgacaaag ggaactcgta attcgatctc
451 cggtgagaat ggcagaggaa aatccgtccg tcttccgacg agtcaaggca
501 aagattgctg aggaagaatt ccagaagagc gctcatgaga ttcaaatttc
551 agatttgaaa tcttggcaat tgcgcctgaa gacgctcctc gacagggacc
601 cagatgaccg cactatcatc tgggtatatg gacccactgg tggggaagga
651 aaatccacct ttgccagaga cttgtacaaa agtgggtcct ggttctatac
701 acgtggtggc tctgctgata atgttagtta tcaatatata ggtcaattag
751 gaaataatat tgtatttgat atccctcgtg ataagaagga ttatctacaa
801 tataatttaa tagagatgtt taaagatagg ttaatagtta gtaataagta
851 cgagcctctt atggctccat taattaattg tattcatgtt gtagttatgt
901 ctaattttct ccctgatttt gagaagatta gcagtgatag ggtccatgta
951 attccttgta tcccttgtgg tgtttgtctt aaacatcaca ttgatgaaat
1001 tagatgttct gagtattttg attaattttg tttctttaaa aaaagaaaga
1051 attaaatgaa aaaaaaaaga aatactatat catattttat tattttaatg
1101 agaattgttg ccccgcaggg gcatctgtta aaaatatttt tgtttcttta
1151 aaaaaagaaa gaatgaaatg aaaaaaaata gtacaaaaaa attaaatagg
1201 catggtttat aatatgggcc atactaagta cgctagatga gagagaaaat
1251 gcaattgggc actgttcata cacggaggga cttaagttgt aatttgtgaa
1301 agattggggc ggttgtgtaa atatctttgg gtcccttgga tataaataac
1351 acgtcacgag gcgggtgtag tatt