Sequence of DPV Papaya ringspot virus

Papaya ringspot virus P partial gene for polyprotein, isolate LangSon3, genomic RNA

ACC No: FN808404

Dated: 2010-04-21 | Length: 1074 | CRC: 1134980606

                
ID   FN808404; SV 1; linear; genomic RNA; STD; VRL; 1074 BP.
XX
AC   FN808404;
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DT   21-APR-2010 (Rel. 104, Created)
DT   21-APR-2010 (Rel. 104, Last updated, Version 1)
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DE   Papaya ringspot virus P partial gene for polyprotein, isolate LangSon3,
DE   genomic RNA
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KW   .
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OS   Papaya ringspot virus P
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1074
RA   Dang H.T.;
RT   ;
RL   Submitted (14-APR-2010) to the EMBL/GenBank/DDBJ databases.
RL   Dang H.T., Plant biotechnology, Institute of biotechnology, 18 Hoang Quoc
RL   Viet road, Ha noi, 844, VIET NAM.
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RN   [2]
RA   Chu H.H., Nguyen H.M., Bui L.C., Dang H.T., Le B.T.;
RT   "Sequence varieties in the coat protein gene of Papaya ringspot virus
RT   isolation from multiple location in Vietnam";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1074
FT                   /organism="Papaya ringspot virus P"
FT                   /isolate="LangSon3"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12206"
FT   CDS             <1. .>1074
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="CBL59308.1"
FT                   /translation="LEQAPFNELAKQGRAPYVSEVGLRRLYTSKRGSMDELEAYIDKYF
FT                   EREKGDSPELLVYHESRSTDDYQFVYGSHAHVFHQSKNEAVDAGLNEKLKEKEKQKEKE
FT                   KEEKKQKDKDSDGASDGNDVSTSTKTGERDRDVNAGTSGTFTVPRIKSFTDKMILPRIK
FT                   GKTVLNLNHLLQYNPQQIDISNTRATQSQFEKWYEGVRNDYGLTDNEMQVMLNGLMVWC
FT                   IENGTSPDISGVWVMMDGETQVDYPIKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATE
FT                   RYMPRYGIKRNLTDISLARYAFDFYEVNSKTPDRAREAHMQMKAAALRNTSRRMFGMDG
FT                   SVSNKGENTERHTVEDVN"
FT   mat_peptide     <1. .264
FT                   /product="NIb"
FT   mat_peptide     265. .>1074
FT                   /product="CP"
XX
SQ   Sequence 1074 BP; 376 A; 173 C; 259 G; 266 T; 0 other;

fn808404 Length: 1074  21-APR-2010  Type: N  Check: 2149  ..

       1  cttgagcaag ctccattcaa tgaattagca aagcagggca gagctccata
      51  tgtatctgag gttggattga ggcgcctata cactagtaag cgtggttcga
     101  tggatgagtt agaagcctat atagataaat attttgagcg agaaaagggg
     151  gattcacctg agttactggt gtatcatgaa tcaagaagca cagacgatta
     201  tcagtttgtc tacggcagtc atgcacatgt atttcaccaa tctaagaatg
     251  aagctgtgga tgctggtctg aatgaaaaac tcaaggaaaa ggaaaagcaa
     301  aaagaaaaag aaaaagaaga aaagaaacaa aaagataaag atagtgatgg
     351  agctagtgac ggaaatgatg tgtcaactag cacaaaaact ggagagagag
     401  atagagatgt caatgccgga actagtggaa ctttcactgt tccaaggata
     451  aagtcattca ctgataagat gattttacca agaattaagg gaaaaactgt
     501  ccttaattta aatcatcttc ttcagtataa tccgcaacaa attgacatct
     551  cgaatactcg tgccactcaa tctcaatttg aaaagtggta tgagggagtg
     601  aggaatgatt atggtcttac tgataacgaa atgcaagtga tgttaaatgg
     651  tttaatggtt tggtgtatcg aaaatggaac atctccagac atatctggtg
     701  tctgggtaat gatggatggg gaaactcagg ttgattatcc catcaaacct
     751  ttaattgaac atgcaactcc ttcatttagg caaatcatgg ctcacttcag
     801  taatgcggca gaagcatata tcgcgaagag aaatgcaact gagaggtaca
     851  tgccgcggta tggaatcaaa aggaatttga ctgacattag tctcgctaga
     901  tatgctttcg atttctatga ggtgaattca aaaacacctg atagggctcg
     951  tgaagctcat atgcagatga aggctgcagc gctacgtaat actagtcgca
    1001  gaatgtttgg aatggacggc agtgtcagta acaagggaga aaacacggag
    1051  agacacacag tggaagatgt caac