Sequence of DPV Papaya ringspot virus

Papaya ringspot virus P partial gene for polyprotein, isolate LangSon4, genomic RNA

ACC No: FN808406

Dated: 2010-04-21 | Length: 1074 | CRC: 586189354

                
ID   FN808406; SV 1; linear; genomic RNA; STD; VRL; 1074 BP.
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AC   FN808406;
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DT   21-APR-2010 (Rel. 104, Created)
DT   21-APR-2010 (Rel. 104, Last updated, Version 1)
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DE   Papaya ringspot virus P partial gene for polyprotein, isolate LangSon4,
DE   genomic RNA
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KW   .
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OS   Papaya ringspot virus P
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1074
RA   Dang H.T.;
RT   ;
RL   Submitted (14-APR-2010) to the EMBL/GenBank/DDBJ databases.
RL   Dang H.T., Plant biotechnology, Institute of biotechnology, 18 Hoang Quoc
RL   Viet road, Ha noi, 844, VIET NAM.
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RN   [2]
RA   Chu H.H., Nguyen H.M., Bui L.C., Dang H.T., Le B.T.;
RT   "Sequence varieties in the coat protein gene of Papaya ringspot virus
RT   isolation from multiple location in Vietnam";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1074
FT                   /organism="Papaya ringspot virus P"
FT                   /isolate="LangSon4"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12206"
FT   CDS             <1. .>1074
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="CBL59310.1"
FT                   /translation="LEQAPFNELAKQGRAPYVSEVGLRRLYTSKRGSMDELEAYINKYF
FT                   ERERGDSPELLVYHESSSTDDYHFVCGSHAHVFHQSKNEAVDAGLNEKLKEKEKQKEKE
FT                   KEKDKQKDKDNNGASDGNDVSTSTKTGERDRDVNAGTSGTFTVPRIKSFTDKMILPRIK
FT                   GKSVLNLNHLLQYNPQQIDISNTRATQSQFEKWYEGVRSDYGLNDNEMQVMLNGLMVWC
FT                   IENGTSPDISGVWVMMDGETQVDYPIKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATE
FT                   RYMPRYGIKRNLTDISLARYAFDFYEVNSKTPDRAREAHMQMKAAALRNASRRMFGIDG
FT                   SVSNKEENTERHTVEDVN"
FT   mat_peptide     <1. .264
FT                   /product="NIb"
FT   mat_peptide     265. .>1074
FT                   /product="CP"
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SQ   Sequence 1074 BP; 367 A; 181 C; 262 G; 264 T; 0 other;

fn808406 Length: 1074  21-APR-2010  Type: N  Check: 4258  ..

       1  cttgagcaag ctccattcaa tgaattagcg aagcagggca gagctccata
      51  tgtgtctgag gttggattaa ggcgcctata caccagtaag cgtggttcga
     101  tggatgagtt ggaagcctac ataaataaat attttgagcg agaaagggga
     151  gattcacctg agctactggt atatcatgaa tcaagtagca cagacgatta
     201  tcattttgtc tgcggcagtc atgcacatgt atttcaccag tccaaaaatg
     251  aagctgtgga tgctggtctg aatgaaaagc tcaaagaaaa ggaaaaacaa
     301  aaagagaaag aaaaagaaaa agataaacaa aaagataagg ataataatgg
     351  agctagtgac ggaaatgatg tgtcaactag cacaaagact ggagagaggg
     401  atagagatgt caacgccgga actagtggaa ctttcactgt tccaaggata
     451  aagtctttta ctgataagat gattttacca agaattaagg gaaagtccgt
     501  ccttaattta aatcatcttc ttcagtataa tccgcaacaa attgacatct
     551  caaacactcg tgccactcaa tctcaatttg aaaagtggta tgagggagtg
     601  aggagtgatt atggtcttaa tgataacgaa atgcaagtga tgttaaatgg
     651  tttgatggtt tggtgtatcg aaaatggtac atctccagac atatctggtg
     701  tctgggtaat gatggatgga gaaactcagg ttgattatcc catcaaacct
     751  ttaattgaac atgcaactcc ttcattcagg cagatcatgg ctcacttcag
     801  taacgcggca gaggcatata tcgcgaagag aaatgcaact gagaggtaca
     851  tgccgcggta tggaattaaa aggaatttga ctgacattag tctcgctcga
     901  tatgcttttg atttctatga ggtgaattca aaaacacctg atagggctcg
     951  tgaagctcat atgcagatga aggctgcagc gctacgcaat gctagtcgca
    1001  gaatgttcgg aatagacggc agtgtcagta acaaggaaga aaacacggag
    1051  aggcacacag tggaagatgt caac