Sequence of DPV Wheat yellow mosaic virus

Wheat yellow mosaic virus partial gene for polyprotein, coat protein region, isolate HN2 clone 31, genomic RNA

ACC No: FR828018

Dated: 2012-02-28 | Length: 879 | CRC: -944138538

                
ID   FR828018; SV 1; linear; genomic RNA; STD; VRL; 879 BP.
XX
AC   FR828018;
XX
DT   28-FEB-2012 (Rel. 111, Created)
DT   28-FEB-2012 (Rel. 111, Last updated, Version 1)
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DE   Wheat yellow mosaic virus partial gene for polyprotein, coat protein
DE   region, isolate HN2 clone 31, genomic RNA
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KW   .
XX
OS   Wheat yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Bymovirus.
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RN   [1]
RP   1-879
RA   Adams M.;
RT   ;
RL   Submitted (22-FEB-2011) to the INSDC.
RL   Department of Plant Pathology and Microbiology, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RA   Sun B., Sun L., Adams M.J., Yang J., XIe L., Chen J.;
RT   "Molecular variation amongst Chinese wheat yellow mosaic virus isolates";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .879
FT                   /organism="Wheat yellow mosaic virus"
FT                   /segment="RNA1"
FT                   /isolate="HN2"
FT                   /mol_type="genomic RNA"
FT                   /collection_date="2009"
FT                   /clone="31"
FT                   /db_xref="taxon:75746"
FT   CDS             <1. .>879
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /protein_id="CBZ98925.1"
FT                   /translation="AADTQTDAQKEEARLAAATKKAADDADAARLRKVEADRVEAARVK
FT                   KASDDKKARDLTATKVDDGKIVADAGTKRTNAATKEKWSLPETKPVNAGLKLRISMDKL
FT                   KSAPKSIIEHDNSIALDSEVKKWSDAVRTSLGITTDEAWINALIPFLGWCANSGASDKH
FT                   AENQTMQVDNGTGTLTEMSLSPFIVHARLNGGLRRILRAYSDETVLLLQEHKIVTKWAM
FT                   KHGASAHAAYAFDFFVPRPWMNPQDIEVAKQARLAALGTGTYNTMLTSDTTNLRKTTNR
FT                   RVLDTDGHPELT"
FT   mat_peptide     1. .879
FT                   /product="coat protein"
XX
SQ   Sequence 879 BP; 270 A; 243 C; 210 G; 156 T; 0 other;

fr828018 Length: 879  28-FEB-2012  Type: N  Check: 4578  ..

       1  gcagctgaca cacaaacaga cgcgcagaag gaggaagctc gactggcagc
      51  cgccacaaag aaggcagccg atgacgccga cgctgcgcgt ctccgcaagg
     101  ttgaggcaga tcgtgttgag gctgcaagag tgaagaaagc aagcgatgac
     151  aagaaagcca gggacctcac agcaaccaag gttgatgatg gcaaaattgt
     201  tgccgacgct ggaacaaaaa ggaccaatgc cgccaccaaa gagaaatggt
     251  cacttccaga aacaaaaccc gtcaacgcag gactaaagct tcgaatctca
     301  atggacaaat taaagagcgc acccaaatct ataatcgaac acgacaactc
     351  catcgctcta gattcagaag ttaagaagtg gtcagacgct gtacgaacca
     401  gtctcggcat caccacggat gaggcatgga tcaatgccct cattcccttc
     451  ctcggatggt gcgccaacag tggcgcttca gacaaacacg cagaaaacca
     501  gaccatgcaa gttgataatg gaactggaac tttaaccgag atgagtctct
     551  ccccattcat tgttcacgct aggttgaatg gtggcttgag acggatcctg
     601  cgagcctaca gtgatgaaac tgtgctcctc cttcaggaac acaagattgt
     651  cacaaaatgg gctatgaaac acggcgcatc tgcacacgcc gcatacgctt
     701  ttgacttctt tgtcccccgc ccgtggatga acccacagga catcgaagtt
     751  gcgaaacaag cacgtcttgc tgctttgggc acaggtacat ataacaccat
     801  gctcacctcc gacacaacca acctccgcaa gacaaccaac cgcagggttc
     851  tggatactga tggacaccca gaactaacc