Sequence of DPV Wheat yellow mosaic virus

Wheat yellow mosaic virus partial gene for polyprotein, coat protein region, isolate JS1 clone 21, genomic RNA

ACC No: FR828039

Dated: 2012-02-28 | Length: 879 | CRC: 970674012

                
ID   FR828039; SV 1; linear; genomic RNA; STD; VRL; 879 BP.
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AC   FR828039;
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DT   28-FEB-2012 (Rel. 111, Created)
DT   28-FEB-2012 (Rel. 111, Last updated, Version 1)
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DE   Wheat yellow mosaic virus partial gene for polyprotein, coat protein
DE   region, isolate JS1 clone 21, genomic RNA
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KW   .
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OS   Wheat yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Bymovirus.
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RN   [1]
RP   1-879
RA   Adams M.;
RT   ;
RL   Submitted (22-FEB-2011) to the INSDC.
RL   Department of Plant Pathology and Microbiology, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
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RN   [2]
RA   Sun B., Sun L., Adams M.J., Yang J., XIe L., Chen J.;
RT   "Molecular variation amongst Chinese wheat yellow mosaic virus isolates";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .879
FT                   /organism="Wheat yellow mosaic virus"
FT                   /segment="RNA1"
FT                   /isolate="JS1"
FT                   /mol_type="genomic RNA"
FT                   /collection_date="2009"
FT                   /clone="21"
FT                   /db_xref="taxon:75746"
FT   CDS             <1. .>879
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /protein_id="CBZ98946.1"
FT                   /translation="AADTQTDAQKEEARLAAATKKAADDADAARLRKVEADRVEAARVK
FT                   KASDDKKARDLTATKVDDGKIVADAGTKRTNAATKEKWSLPETKPVNAGLKPRISMDKL
FT                   KSAPKSIIEHNNSIALDSEVKKWSDAVRTSLGITTDEAWINALIPFLGWCANSGASDKH
FT                   AENQTMQVDNGTGALTEMSLSPFIVHARLNGGLRRILRAYSDETVLLLQEHKIVTKWAM
FT                   KHGASAHAAYAFDFFVPRPWMNPQDIEVAKQARLAALGTGTHNTMLTSDTTNLRKTTNR
FT                   RVLDTDGHPELT"
FT   mat_peptide     1. .879
FT                   /product="coat protein"
XX
SQ   Sequence 879 BP; 266 A; 245 C; 213 G; 155 T; 0 other;

fr828039 Length: 879  28-FEB-2012  Type: N  Check: 5376  ..

       1  gcagctgaca cacaaacaga cgcgcagaag gaggaagctc gactggcagc
      51  cgccactaag aaggcagccg atgatgccga cgctgcgcgt ctccgcaagg
     101  ttgaggcaga tcgtgttgag gccgcaagag tgaagaaagc aagcgatgac
     151  aagaaagcca gggacctcac agcaaccaag gttgatgacg gcaaaattgt
     201  tgccgacgct ggaacaaaaa ggaccaatgc cgccaccaaa gagaaatggt
     251  cacttccaga aacaaaaccc gtcaacgcag gactaaagcc tcgaatctca
     301  atggacaaat taaagagcgc acccaaatct ataatcgaac acaacaactc
     351  catcgctcta gattcagaag ttaagaagtg gtcagacgct gtgcggacca
     401  gtcttggcat caccacggat gaggcatgga tcaatgccct cattcccttc
     451  ctcggatggt gcgccaacag tggcgcttca gacaaacacg cagaaaacca
     501  gaccatgcaa gttgataatg gaactggggc tttaaccgag atgagtctct
     551  ccccattcat tgttcacgct aggttgaatg gtggcttgag acggatccta
     601  cgagcctaca gtgatgaaac tgtgctcctc cttcaggaac acaagattgt
     651  cacaaaatgg gctatgaaac acggcgcatc tgcacacgcc gcgtatgcct
     701  ttgacttctt tgtcccccgc ccgtggatga acccacagga catcgaagtt
     751  gcgaaacaag cacgtcttgc tgctttgggc acaggtacac acaataccat
     801  gctcacctcc gacacaacca acctccgcaa gacaaccaac cgcagggttc
     851  tggatactga tggacaccca gaactaacc