Sequence of DPV Wheat yellow mosaic virus

Wheat yellow mosaic virus partial gene for polyprotein, coat protein region, isolate SD3 clone 22, genomic RNA

ACC No: FR828192

Dated: 2012-02-28 | Length: 879 | CRC: 1005192710

                
ID   FR828192; SV 1; linear; genomic RNA; STD; VRL; 879 BP.
XX
AC   FR828192;
XX
DT   28-FEB-2012 (Rel. 111, Created)
DT   28-FEB-2012 (Rel. 111, Last updated, Version 1)
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DE   Wheat yellow mosaic virus partial gene for polyprotein, coat protein
DE   region, isolate SD3 clone 22, genomic RNA
XX
KW   .
XX
OS   Wheat yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Bymovirus.
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RN   [1]
RP   1-879
RA   Adams M.;
RT   ;
RL   Submitted (22-FEB-2011) to the INSDC.
RL   Department of Plant Pathology and Microbiology, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RA   Sun B., Sun L., Adams M.J., Yang J., XIe L., Chen J.;
RT   "Molecular variation amongst Chinese wheat yellow mosaic virus isolates";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .879
FT                   /organism="Wheat yellow mosaic virus"
FT                   /segment="RNA1"
FT                   /isolate="SD3"
FT                   /mol_type="genomic RNA"
FT                   /collection_date="2009"
FT                   /clone="22"
FT                   /db_xref="taxon:75746"
FT   CDS             <1. .>879
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /protein_id="CBZ99099.1"
FT                   /translation="AADTQTDAQKEEARLAAATKKASDDADAARLRKVEADRVEAARVK
FT                   KASDDKKAKDLTATKVDDGKIVADAGTKRTNAATKEKWSLPETKPVNAGLKLRISMDKL
FT                   KSAPKSIVEHDNSVALDSEVKKWSDAVRTSLGITTDEAWINALIPFLGWCANSGASDKH
FT                   AENQTMQVDNGTGALTEMSLSPFIVHARLNGGLRRILRAYSDETVLLLQEHKIVTKWAM
FT                   KHGASAHAAYAFDFFVPRPWMNPHDIEVAKQARLAALGTCTYNTMLTSDTPNLGKTTNR
FT                   RVLDTDGHPELT"
FT   mat_peptide     1. .879
FT                   /product="coat protein"
XX
SQ   Sequence 879 BP; 267 A; 243 C; 211 G; 158 T; 0 other;

fr828192 Length: 879  28-FEB-2012  Type: N  Check: 4310  ..

       1  gcagctgaca cacaaacaga cgcgcagaag gaggaagctc gactggcagc
      51  cgccaccaag aaggcatccg atgatgccga cgctgcgcgt ctccgcaagg
     101  ttgaagcaga tcgtgttgag gccgcaagag tgaagaaagc gagcgatgac
     151  aagaaagcca aggacctcac agcaaccaag gttgatgatg gcaaaattgt
     201  tgccgacgct ggaacaaaaa ggaccaatgc cgccaccaaa gagaaatggt
     251  cacttccaga aacaaaaccc gtcaacgcag gactaaagct tcgaatctca
     301  atggacaaat taaagagcgc acccaaatct atagtcgaac acgacaactc
     351  cgtcgctcta gattcagaag ttaagaagtg gtcagacgct gtacggacaa
     401  gtcttggcat aaccacggat gaggcatgga tcaatgccct cattcccttc
     451  ctcggatggt gcgccaacag tggcgcttca gacaaacacg cagaaaacca
     501  gaccatgcaa gttgataatg gaactggagc tttaaccgag atgagtctct
     551  ccccattcat tgttcacgct aggttgaatg gtggcttgag acggatcctg
     601  cgagcctaca gtgatgaaac tgtgctcctc cttcaggaac acaagattgt
     651  cacaaaatgg gccatgaaac acggcgcatc cgcacacgcc gcgtacgctt
     701  ttgacttctt tgtcccccgc ccgtggatga acccacacga catcgaagtt
     751  gcgaaacaag cacgtcttgc tgctttaggc acatgtacat acaataccat
     801  gctcacttcc gacacaccca acctcggcaa gacaaccaac cgcagggttc
     851  tggatactga tggacaccca gaactaacc