Sequence of DPV Wheat yellow mosaic virus

Wheat yellow mosaic virus partial gene for polyprotein, coat protein region, isolate SX2 clone 30, genomic RNA

ACC No: FR828227

Dated: 2012-02-28 | Length: 879 | CRC: 1750602392

                
ID   FR828227; SV 1; linear; genomic RNA; STD; VRL; 879 BP.
XX
AC   FR828227;
XX
DT   28-FEB-2012 (Rel. 111, Created)
DT   28-FEB-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Wheat yellow mosaic virus partial gene for polyprotein, coat protein
DE   region, isolate SX2 clone 30, genomic RNA
XX
KW   .
XX
OS   Wheat yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Bymovirus.
XX
RN   [1]
RP   1-879
RA   Adams M.;
RT   ;
RL   Submitted (22-FEB-2011) to the INSDC.
RL   Department of Plant Pathology and Microbiology, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RA   Sun B., Sun L., Adams M.J., Yang J., XIe L., Chen J.;
RT   "Molecular variation amongst Chinese wheat yellow mosaic virus isolates";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .879
FT                   /organism="Wheat yellow mosaic virus"
FT                   /segment="RNA1"
FT                   /isolate="SX2"
FT                   /mol_type="genomic RNA"
FT                   /collection_date="2009"
FT                   /clone="30"
FT                   /db_xref="taxon:75746"
FT   CDS             <1. .>879
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /protein_id="CBZ99134.1"
FT                   /translation="AADTQTDAQKEEARLAAATKKAADDADAARLRKVEADRVEAARVK
FT                   KASDDKKARDLTATKVDDGKIVADAGTKRTNAATKEKWSLPETKPVNAGLKLRISMDKL
FT                   KSAPKSIVEHDNSVALDSEVKKWSDAVRTSLGITTDEAWINTLIPFLGWCANSGASDKH
FT                   AENQTMQVDDGTGVLTEMSLSPFIVHARLNGGLRRILRAYSDETVLLLQEHKIVTKWAM
FT                   KHGASAHAAYAFDFFVPRPWMNPQDIEVAKQARLAALGTGTYNTMLTSDTTNLRKTTNR
FT                   RVLDTDGHPEIT"
FT   mat_peptide     1. .879
FT                   /product="coat protein"
XX
SQ   Sequence 879 BP; 264 A; 244 C; 215 G; 156 T; 0 other;

fr828227 Length: 879  28-FEB-2012  Type: N  Check: 5780  ..

       1  gcagctgaca cacaaacaga cgcgcagaag gaggaagctc gactggcagc
      51  cgccaccaag aaggcagccg atgacgccga cgctgcgcgt ctccgcaagg
     101  ttgaggcaga tcgtgttgag gccgcaagag tgaagaaagc gagcgatgac
     151  aagaaagcca gggacctcac agcaaccaag gttgatgatg gcaaaatcgt
     201  cgccgacgct ggaacaaaaa ggaccaatgc cgccaccaaa gagaaatggt
     251  cacttccaga aacaaaaccc gtcaacgcag gactaaagct tcgaatctca
     301  atggacaaat taaagagcgc acccaaatct atagtcgaac acgacaactc
     351  cgtcgctctg gattcagaag ttaagaagtg gtcagatgct gtacgaacca
     401  gccttggcat caccacggat gaggcatgga tcaacaccct cattcccttc
     451  cttggatggt gcgccaacag tggtgcttca gacaaacacg cagaaaacca
     501  gaccatgcaa gttgatgatg gtactggagt tttaaccgag atgagtctct
     551  ccccattcat tgttcacgct aggttgaatg gtggcttgag acggatcctg
     601  cgagcctaca gtgatgaaac tgtgctcctc cttcaggaac acaagattgt
     651  cacaaaatgg gctatgaaac acggcgcatc tgcacacgcc gcgtacgctt
     701  ttgacttctt tgtcccccgc ccgtggatga acccacagga catcgaagtt
     751  gcgaaacaag cacgtcttgc tgctttaggc acaggtacat acaataccat
     801  gctcacctcc gacacaacca acctccgcaa gacaaccaac cgcagggttc
     851  tggataccga tggacaccca gaaataacc