Sequence of DPV Wheat yellow mosaic virus

Wheat yellow mosaic virus partial gene for polyprotein, coat protein region, isolate SX2 clone 34, genomic RNA

ACC No: FR828229

Dated: 2012-02-28 | Length: 879 | CRC: 873536864

                
ID   FR828229; SV 1; linear; genomic RNA; STD; VRL; 879 BP.
XX
AC   FR828229;
XX
DT   28-FEB-2012 (Rel. 111, Created)
DT   28-FEB-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Wheat yellow mosaic virus partial gene for polyprotein, coat protein
DE   region, isolate SX2 clone 34, genomic RNA
XX
KW   .
XX
OS   Wheat yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Bymovirus.
XX
RN   [1]
RP   1-879
RA   Adams M.;
RT   ;
RL   Submitted (22-FEB-2011) to the INSDC.
RL   Department of Plant Pathology and Microbiology, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RA   Sun B., Sun L., Adams M.J., Yang J., XIe L., Chen J.;
RT   "Molecular variation amongst Chinese wheat yellow mosaic virus isolates";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .879
FT                   /organism="Wheat yellow mosaic virus"
FT                   /segment="RNA1"
FT                   /isolate="SX2"
FT                   /mol_type="genomic RNA"
FT                   /collection_date="2009"
FT                   /clone="34"
FT                   /db_xref="taxon:75746"
FT   CDS             <1. .>879
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /protein_id="CBZ99136.1"
FT                   /translation="AADTQTDAQKEEARLAAATKKAADDADAARLRKVEADRVEAARVK
FT                   KASDDKKARDLTATKVDDGKIVADAGTKRTNAATKEKWSLPETKPVNAGLKLRISMDKL
FT                   KSAPKSIVEHDNSIALDSEVKKWSDAVRTSLGITTDEAWINTLIPFLGWCANSGASDKH
FT                   AENQTMQVDNGTGVLTEMSLSPFIVHARLNGGLRRILRAYSDETVLLLQEHKIVTKWAM
FT                   KHGASAHAAYAFDFFVPRPWMNPQDIEVAKQARLAALGTGTYNTMLTSDTTNLRKTTNR
FT                   RVLDTDGHPELT"
FT   mat_peptide     1. .879
FT                   /product="coat protein"
XX
SQ   Sequence 879 BP; 265 A; 242 C; 213 G; 159 T; 0 other;

fr828229 Length: 879  28-FEB-2012  Type: N  Check: 6091  ..

       1  gcagctgaca cacaaacaga cgcgcagaag gaggaagctc gactggcagc
      51  cgccaccaag aaggcagccg atgacgccga cgctgcgcgt ctccgcaagg
     101  ttgaggcaga tcgtgttgag gccgcaagag tgaagaaagc gagcgatgac
     151  aagaaagcca gggacctcac agcaaccaag gttgatgatg gcaaaatcgt
     201  cgccgacgct ggaacaaaaa ggaccaatgc cgccaccaaa gagaaatggt
     251  cacttccaga aacaaaaccc gtcaacgcag gactaaagct tcgaatttca
     301  atggacaaat taaagagcgc acccaaatct atagtcgaac acgacaattc
     351  catcgctctg gattcagaag ttaagaagtg gtcagatgct gtacgaacca
     401  gtcttggcat caccacggat gaggcatgga tcaacaccct cattcccttc
     451  cttggatggt gcgccaacag tggtgcttca gacaaacacg cagaaaacca
     501  gaccatgcaa gttgataatg gtactggagt tttaaccgag atgagtctct
     551  ccccattcat tgttcacgct aggttgaatg gtggcttgag acggatcctg
     601  cgagcctaca gtgatgaaac tgtgctcctc cttcaggaac acaagattgt
     651  cacaaaatgg gctatgaaac acggcgcatc tgcacacgcc gcgtacgctt
     701  ttgacttctt tgtcccccgc ccgtggatga acccacagga catcgaagtt
     751  gcgaaacaag cacgtcttgc tgctttaggc acaggtacat acaataccat
     801  gctcacctcc gacacaacca acctccgcaa gacaaccaac cgcagggttc
     851  tggataccga tggacaccca gaactaacc