Sequence of DPV Wheat yellow mosaic virus

Wheat yellow mosaic virus partial gene for polyprotein, VPg protein region, isolate JS1 clone 21, genomic RNA

ACC No: FR828309

Dated: 2012-02-28 | Length: 561 | CRC: 1084708362

                
ID   FR828309; SV 1; linear; genomic RNA; STD; VRL; 561 BP.
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AC   FR828309;
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DT   28-FEB-2012 (Rel. 111, Created)
DT   28-FEB-2012 (Rel. 111, Last updated, Version 1)
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DE   Wheat yellow mosaic virus partial gene for polyprotein, VPg protein region,
DE   isolate JS1 clone 21, genomic RNA
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KW   .
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OS   Wheat yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Bymovirus.
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RN   [1]
RP   1-561
RA   Adams M.;
RT   ;
RL   Submitted (22-FEB-2011) to the INSDC.
RL   Department of Plant Pathology and Microbiology, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
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RN   [2]
RA   Sun B., Sun L., Adams M.J., Yang J., XIe L., Chen J.;
RT   "Molecular variation amongst Chinese wheat yellow mosaic virus isolates";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .561
FT                   /organism="Wheat yellow mosaic virus"
FT                   /segment="RNA1"
FT                   /isolate="JS1"
FT                   /mol_type="genomic RNA"
FT                   /collection_date="2009"
FT                   /clone="21"
FT                   /db_xref="taxon:75746"
FT   CDS             <1. .>561
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /protein_id="CBZ99216.1"
FT                   /translation="GKGNKYRPREDARLMYSTRDDATFDTWNEKAKEKRKKISDRAEPE
FT                   MKQPYQKRPYYNFYDLQTDSNILEAIFYTTEGDEFFRTANPNKDMHSVAEKLKAFLDTK
FT                   PIIGRHQRQLLEETAQVVIKDDKGTAHRMDISTHNPNTLKNNGSGRVGYDEHRGDFRQE
FT                   SPALESPYELEAEFGNSKDEVMLE"
FT   mat_peptide     1. .561
FT                   /product="VPg protein"
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SQ   Sequence 561 BP; 198 A; 137 C; 129 G; 97 T; 0 other;

fr828309 Length: 561  28-FEB-2012  Type: N  Check: 3713  ..

       1  ggaaagggaa acaagtatcg accacgagag gacgcacgtc tgatgtactc
      51  cacgagagac gacgcaacct tcgatacatg gaacgagaaa gctaaggaga
     101  aaaggaagaa gatatcagac cgcgcagagc cagagatgaa acaaccttac
     151  cagaagcgtc catactataa cttctacgac cttcaaactg atagcaacat
     201  tctcgaggca atattctaca ccacggaagg tgacgaattc ttccggacgg
     251  caaatcccaa caaggacatg cactcagtag ctgaaaaact aaaagctttc
     301  cttgacacaa aaccaatcat aggcagacac cagcgccagc tccttgagga
     351  aaccgctcag gtcgttatca aagacgacaa aggcactgcc cacagaatgg
     401  acatatcaac tcacaaccct aacactctta agaacaatgg atcaggaaga
     451  gttgggtatg atgagcatcg cggcgatttc aggcaagaga gccctgcact
     501  tgagtcaccg tacgagttgg aagctgaatt cggaaactca aaggatgaag
     551  tcatgcttga a