Sequence of DPV Barley yellow mosaic virus

Barley yellow mosaic virus partial gene for polyprotein, VPg gene region, isolate DW319-BS, genomic RNA

ACC No: FR848377

Dated: 2012-01-10 | Length: 561 | CRC: 487083079

                
ID   FR848377; SV 1; linear; genomic RNA; STD; VRL; 561 BP.
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AC   FR848377;
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DT   10-JAN-2012 (Rel. 111, Created)
DT   10-JAN-2012 (Rel. 111, Last updated, Version 1)
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DE   Barley yellow mosaic virus partial gene for polyprotein, VPg gene region,
DE   isolate DW319-BS, genomic RNA
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KW   .
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OS   Barley yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Bymovirus.
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RN   [1]
RP   1-561
RA   Kuehne T.;
RT   ;
RL   Submitted (25-MAR-2011) to the INSDC.
RL   Kuehne T., EP, Julius Kuehn-Institute, Quedlinburg, Erwin-Baur-Strasse 27,
RL   06484, GERMANY.
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RN   [2]
RA   Kuehne T., Fomitcheva V.F., Habekuss A., Rabenstein F.;
RT   "Sequence variability of the VPg-encoding region of German isolates of
RT   Barley yellow mosaic virus";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .561
FT                   /organism="Barley yellow mosaic virus"
FT                   /isolate="DW319-BS"
FT                   /mol_type="genomic RNA"
FT                   /identified_by="Thomas Kuehne"
FT                   /note="pathotype 1"
FT                   /db_xref="taxon:12465"
FT   CDS             <1. .>561
FT                   /product="polyprotein"
FT                   /protein_id="CCA61779.1"
FT                   /translation="GKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKAEPE
FT                   LRRAYEKRPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADPNRDMNLVADKLRSFLDTK
FT                   LVVGHHQRKLLEETANVVIKDTKGTAHKMEISQHDPDFLKQNGSGKVGYPEHRGQFRQE
FT                   GVAVTGDYDLEAEFGADADEITLE"
FT   mat_peptide     1. .561
FT                   /product="VPg protein"
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SQ   Sequence 561 BP; 176 A; 123 C; 144 G; 118 T; 0 other;

fr848377 Length: 561  10-JAN-2012  Type: N  Check: 9716  ..

       1  ggcaagggaa acaaataccg ccctcgcgaa gacgctcgcc tgatgtactc
      51  cactagagaa gacgccacct ttgacgcctg gaatgagaaa gcgaaggaaa
     101  gacgcaagaa agtaaccgac aaagctgagc cagagcttcg gagagcctat
     151  gagaagagac catatttcaa tttctacgac cttcaaacag atagcaacat
     201  tctggaagct attttctaca ccactgaagg tgatgagttt ttccgaacag
     251  cagaccctaa cagggacatg aacttggttg ctgataaact gcgctctttt
     301  ctcgatacaa agcttgttgt tggacaccat cagcggaagc tactagaaga
     351  aacagctaat gttgttatca aggacacgaa gggaactgcg cacaagatgg
     401  aaatttcaca gcatgatcca gattttctga agcagaatgg gtccggcaaa
     451  gttgggtatc cagaacaccg aggacagttt cggcaggaag gagttgccgt
     501  cacaggggat tacgatcttg aagctgagtt tggcgccgat gctgatgaaa
     551  taacgcttga g