Sequence of DPV Barley yellow mosaic virus

Barley yellow mosaic virus partial gene for polyprotein, VPg gene region, isolate 91484, genomic RNA

ACC No: FR848390

Dated: 2012-01-10 | Length: 561 | CRC: 238676127

                
ID   FR848390; SV 1; linear; genomic RNA; STD; VRL; 561 BP.
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AC   FR848390;
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DT   10-JAN-2012 (Rel. 111, Created)
DT   10-JAN-2012 (Rel. 111, Last updated, Version 1)
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DE   Barley yellow mosaic virus partial gene for polyprotein, VPg gene region,
DE   isolate 91484, genomic RNA
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KW   .
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OS   Barley yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Bymovirus.
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RN   [1]
RP   1-561
RA   Kuehne T.;
RT   ;
RL   Submitted (25-MAR-2011) to the INSDC.
RL   Kuehne T., EP, Julius Kuehn-Institute, Quedlinburg, Erwin-Baur-Strasse 27,
RL   06484, GERMANY.
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RN   [2]
RA   Kuehne T., Fomitcheva V.F., Habekuss A., Rabenstein F.;
RT   "Sequence variability of the VPg-encoding region of German isolates of
RT   Barley yellow mosaic virus";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .561
FT                   /organism="Barley yellow mosaic virus"
FT                   /isolate="91484"
FT                   /mol_type="genomic RNA"
FT                   /identified_by="Thomas Kuehne"
FT                   /note="pathotype 2"
FT                   /db_xref="taxon:12465"
FT   CDS             <1. .>561
FT                   /product="polyprotein"
FT                   /protein_id="CCA61792.1"
FT                   /translation="GKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKAEPE
FT                   LRRAYEKRPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADPNKDMNLVADKLRSFLDTK
FT                   LVVGHHQRKLLEETAAVVIRDTKGTAHNMEISQHDPDFLKQNGSGKVGYPEHRGQFRQE
FT                   GVAITADYDLEAEFGADTDEITLE"
FT   mat_peptide     1. .561
FT                   /product="VPg protein"
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SQ   Sequence 561 BP; 173 A; 129 C; 144 G; 115 T; 0 other;

fr848390 Length: 561  10-JAN-2012  Type: N  Check: 8808  ..

       1  ggcaagggaa acaaataccg ccctcgcgaa gacgctcgcc tgatgtactc
      51  cactagagag gacgccacct ttgacgcctg gaatgagaaa gcgaaggaaa
     101  gacgtaagaa ggtaaccgac aaagctgagc cagagcttcg gcgagcctac
     151  gagaagagac catacttcaa tttctacgac cttcaaacag atagcaacat
     201  tctggaagct attttctaca ccactgaagg cgatgagttt ttccgaacag
     251  cagaccctaa taaggacatg aacttggttg ctgataaact acgctccttt
     301  ctcgatacaa agcttgttgt tggacaccat cagcggaagc tactggaaga
     351  aacagctgcg gttgttatta gggatacgaa gggaactgcg cacaacatgg
     401  aaatttcaca gcatgatcca gattttctga agcagaatgg gtccggcaaa
     451  gttgggtatc cagaacaccg aggacagttt cggcaggaag gagttgccat
     501  cacagcggat tacgatcttg aagctgagtt tggcgccgac accgatgaaa
     551  taacgcttga g