Sequence of DPV Ageratum leaf curl Cameroon virus
Ageratum leaf curl Cameroon virus [CM:AGFG24:2009] complete A component, isolate AGFG24
ACC No: FR873228
Dated: 2011-06-24 | Length: 2792 | CRC: -1566848069
ID FR873228; SV 1; circular; genomic DNA; STD; VRL; 2792 BP.
XX
AC FR873228;
XX
DT 24-JUN-2011 (Rel. 109, Created)
DT 24-JUN-2011 (Rel. 109, Last updated, Version 1)
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DE Ageratum leaf curl Cameroon virus [CM:AGFG24:2009] complete A component,
DE isolate AGFG24
XX
KW .
XX
OS Ageratum leaf curl Cameroon virus [CM:AGFG24:2009]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-2792
RA Nkeabeng Leke W.W.;
RT ;
RL Submitted (07-JUN-2011) to the INSDC.
RL Nkeabeng Leke W.W., Forest Genetics, SLU, Department of Plant Bilogy and
RL Forest Genetics, Box 7080, SE-750 07, SWEDEN.
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RN [2]
RA Leke W.N., Brown J.K., Ligthart M.E., Sattar N., Njualem D.K.,
RA Kvarnheden A.;
RT "Ageratum conyzoides: a host to a unique begomovirus disease complex in
RT Cameroon";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .2792
FT /organism="Ageratum leaf curl Cameroon virus
FT [CM:AGFG24:2009]"
FT /host="Ageratum conyzoides"
FT /isolate="AGFG24"
FT /mol_type="genomic DNA"
FT /country="Cameroon:South Western"
FT /collected_by="Leke Walter"
FT /identified_by="Leke Walter"
FT /db_xref="taxon:1048735"
FT CDS 167. .517
FT /gene="V2"
FT /product="pre-coat protein"
FT /protein_id="CCC14808.1"
FT /translation="MWDPLLNEFPDSVHGFRCMLGIKYLQLLEEEYEPNTLGHDLIRDL
FT ISVIRAKNYVEATRRYNNFHARLEGASTSELRQPLHQPCCCPHCPRHKQASFMDVPAHV
FT PKAQNVPDVQNP"
FT CDS 327. .1097
FT /gene="V1"
FT /product="coat protein"
FT /protein_id="CCC14809.1"
FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTSRAAVPTVRGISKRRSW
FT TYRPMYRKPRMYRMFRTPDIPRGCEGPCKVQSYEQRDDVKHVGIVRCVSDVTRGSGLTH
FT RVGKRFCIKSIYILGKVWMDENIKKQNHTNNVMFFLVRDRRPTFQKISWHEFLSSYNEP
FT STATIKNDLRDRYQVLRKFSATVIGGPSGCKEQTLVKRFFRVNNHVVYSHQEEAKYANH
FT TENALLLYMACTHASNPVYATLKIRIYFYDAVTN"
FT CDS complement(1094. .1498)
FT /gene="C3"
FT /product="replication enhancement protein"
FT /protein_id="CCC14810.1"
FT /translation="MDSRTGELITAHQAWNGVFIWEIQNPLYFKITNHDERPFNYQHDI
FT ITVQIRFNHNLRKALGIHKCFLNFKVWTSLRPQTGRFLRVFRVQVLKYLDNLGVISINA
FT IIRAVDHVLYNVLEGTSNVLEAHEIKFNIY"
FT CDS complement(1239. .1646)
FT /gene="C2"
FT /product="transcriptional activation protein"
FT /protein_id="CCC14811.1"
FT /translation="MRPSSPSTSHSTQVPIKVQHRIAKQKVVRRKRVDLECGCSYFIHI
FT NCSNHGFTHRGTHHCASSLEWRFYLGDTKSPVFQDNQPRRETVQLPTRHNNSTNQVQPQ
FT PAEGVGDSQVFSELQSLDELTPSDWSFLKGI"
FT CDS complement(1555. .2634)
FT /gene="C1"
FT /product="replication-associated protein"
FT /protein_id="CCC14812.1"
FT /translation="MPTQRKFLINAKNYFLTFPKCSLSKEEALEQILKLNTPTNKKYIK
FT ICRELHENGEPHLHVLMQFEGKYKCQNQRFFDLISPNRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTLEWGEFQIDARSARGGQQTANDAYARAINSGSKQEALNILKELAPRDFVYGFH
FT NLNSNLDRIFQAPPEVYISPFLSSSFDQVPEELEEWVSENVCAAAARPWRPISIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPIQIKGGIPTIFLCNQGPTSSYKEYLEEEKNASLKAWAIKNATFVTLNEPL
FT YSGTDQSAASYREAESSEA"
FT CDS complement(2175. .2477)
FT /gene="C4"
FT /product="C4 protein"
FT /protein_id="CCC14813.1"
FT /translation="MANLISMCLCNSKGSTSARISDSSTSYPLTGQHISIRTYRELNPA
FT PMSSPTSTRTATPSNGENFKSMQDLQEEANKQPMMLTPEQLTQEVNKRLLIYLRN"
XX
SQ Sequence 2792 BP; 740 A; 573 C; 605 G; 874 T; 0 other;
fr873228 Length: 2792 24-JUN-2011 Type: N Check: 8014 ..
1 accggatggc cgcgattttt tttcccgtac acgctccaaa gtaaaagtaa
51 agtaactagt ggtccccgcc cactaacaaa tgtcagccaa tcagaatgaa
101 gcctgaaagc tttcttatct agattttgtc tttatatact tgctcgccaa
151 gtagttttat tgcaacatgt gggacccatt attgaacgag tttccagact
201 ctgttcatgg ttttcgttgt atgctgggta taaaatatct gcagctttta
251 gaagaggagt acgagcccaa tactttggga cacgatttaa ttagagatct
301 catatctgtc attagggcta agaattatgt cgaagcgacc cggcgatata
351 ataatttcca cgcccgtctc gaaggtgcgt cgacgtctga acttcgacag
401 cccctacacc agccgtgctg ctgtccccac tgtccgaggc ataagcaagc
451 gtcgttcatg gacgtaccgg cccatgtacc gaaagcccag aatgtaccgg
501 atgttcagaa cccctgacat ccctcgtgga tgtgaaggcc catgtaaggt
551 ccagtcgtat gagcagagag atgatgtcaa gcacgtgggt atagttcgtt
601 gtgttagtga tgtgacccgt gggtccggtc tgactcatag agtagggaag
651 agattttgca ttaagtctat ttatatttta ggtaaagttt ggatggatga
701 aaacatcaag aagcagaatc atactaacaa tgttatgttt ttcttagttc
751 gtgatcgtag gcctaccttt cagaagattt catggcacga gtttttaagc
801 agttacaacg agcccagtac agctactatc aagaatgatc tcagagaccg
851 ttatcaagtg ctgcgtaaat tcagtgctac tgttattggt ggtccctctg
901 gatgcaagga acagactttg gtgaagagat tttttagagt taacaatcat
951 gttgtttata gtcatcagga ggaggctaaa tatgccaacc atactgagaa
1001 tgctttgttg ttgtatatgg cttgtactca tgcctctaac cctgtgtatg
1051 ctactctgaa aatacgcatc tatttctacg atgcagttac gaattaataa
1101 atattaaatt ttatttcatg tgcttctaat acattgcttg taccttcaag
1151 tacgttgtac aatacatgat caactgctct aataattgca ttaattgaaa
1201 ttacacccaa attatctaaa tactttaaca cttgaaccct aaataccctt
1251 aagaaacgac cagtctgagg gcgtaagctc gtccagactt tgaagttcag
1301 aaaacacttg tgaatcccca acgccttccg caggttgtgg ttgaacctga
1351 tttgtactgt tattatgtcg tgttggtagt tgaacggtct ctcgtcgtgg
1401 ttggttatct tgaaatacag gggattttgt atctcccaga taaaaacgcc
1451 attccaagct tgatgcgcag tgatgagttc ccctgtgcgt gaatccatga
1501 ttactgcagt taatatgtat gaagtatgag cacccgcact ctaagtccac
1551 cctcttacgc ctcactactt tctgcttcgc gatacgatgc tgcactttga
1601 tcggtacctg agtagagtgg ctcgttgagg gtgacgaagg tcgcattctt
1651 aatagcccag gcttttagtg atgcattctt ttcctcttcc agatattcct
1701 tatatgatga tgtcggtcct tgattgcaga ggaagatagt gggaattcca
1751 cctttaattt gaatgggctt cccgtacttg gtgttgcttt gccagtctct
1801 ttgggccccc ataaactctt taaagtgttt tagatagtgg ggatctacgt
1851 catcaatgac gttataccaa gcatcatttg aatacacctt tgggcttaga
1901 tcaagatgac cacacaaata gttgtgtgga cctaatgacc tggcccacat
1951 ggtcttgcct gttctactat caccctcaat aacaatacta atcggtctcc
2001 aaggccgcgc agcggcagca cacacgttct cagaaaccca ctcttcaagt
2051 tcttccggaa cttgatcaaa agaagaagat aaaaaaggag aaatatacac
2101 ttcaggcgga gcctgaaaaa tcctatctaa attactgttt aaattatgaa
2151 aaccataaac aaaatctcta ggagctagtt ccttaagtat attaagagcc
2201 tcttgtttac ttcctgagtt aattgctctg gcgtaagcat cattggctgt
2251 ttgttggcct cctcttgcag atcttgcatc gatttgaaat tctccccatt
2301 cgagggtgtc gccgtccttg tcgatgtagg acttgacatc ggagctggat
2351 ttagctccct gtatgttcgg atggaaatgt gctgacctgt taggggatat
2401 gaggtcgaag aatcgctgat tctggcactt gtacttccct tcgaattgca
2451 taagcacatg gagatgaggt tcgccattct cgtggagttc tctgcaaatt
2501 ttaatatatt ttttattggt tggggtattt aatttgagta tttgttcgag
2551 tgcctcttct ttggatagag agcattttgg gaaagtgagg aaataatttt
2601 ttgcatttat aagaaatttt cgttgggtag gcatgttggt cagaggaccc
2651 gattgactct ctattcaatc tttcatatgt atcgggtccc tgggtcctta
2701 tttatatgtg aggaccttaa tggcattatt gtaattaggt aaaagtaata
2751 cgctttaatt caaattggta aagcggccat ccgtataata tt